Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00753 ATGGCGCCGGCGAAGCAGAGAGCACCTAGGGTCACCAGAAACCCTGAATTGATTAGGGGTATTGGAAAGTACTCCAAATCCAAGATGTACCACAAGAGGGGTATCTGGGCTATTAAGGCAAAAAACGGCGGCGTTTTACCTCGCCATGATCCTAAACCTAAACCCGAATCACCTGCTGAGAAACCACCAAAATTTTACCCCGCTGATGATGTGAAGAAACCCCTTCGCAACAAGCATAAGCCTAAACCTACTAAGCTCAGGTTACTTATCACTATGAATCCCTCTTTCACTTGTTCATGTTTTTTAGAGGTTGTGTTTTTGAAGCAGCTTCCTTCTGGGTTGCTTCTTGTAACTGGTCCTTTCAAGATTAATGGAGTTCCTTTGAGACGTGTAAATCAGTCCTATGTGATTGGTACATCGACCAAAGTAGATATTTCTGCTGTTAATGTTGATAAATTTGATGACAAGTACTTCTCCAAGGAAGCCCCTAAAAAGAAGACCAAGGGAGAAGGCGAATTCTTTGAGGCAGAGAATGAGGAGAAAAAGACATTGCCTCAGGAGAAGAAGGATGACCAGAAAACTGTGGACTCCGCTTTGCTAAAAGCCATTGAGAGTGTTCCTGACTTAAAGACTTATCTTGGTGCCAGGTTTTCTCTCAAGTCAGGCGTGAAGCCACACGAGCTAGTCTTCTAG 693 0.4401 MAPAKQRAPRVTRNPELIRGIGKYSKSKMYHKRGIWAIKAKNGGVLPRHDPKPKPESPAEKPPKFYPADDVKKPLRNKHKPKPTKLRLLITMNPSFTCSCFLEVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPKKKTKGEGEFFEAENEEKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFSLKSGVKPHELVF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00753 230 MobiDBLite consensus disorder prediction 41 80 - -
Car06g00753 230 PANTHER 60S RIBOSOMAL PROTEIN L6 1 230 - -
Car06g00753 230 PANTHER 60S RIBOSOMAL PROTEIN L6 1 230 IPR000915 GO:0003735|GO:0005840|GO:0006412
Car06g00753 230 MobiDBLite consensus disorder prediction 169 192 - -
Car06g00753 230 Pfam Ribosomal protein L6, N-terminal domain 4 62 IPR005568 GO:0003735|GO:0005840|GO:0006412
Car06g00753 230 MobiDBLite consensus disorder prediction 45 76 - -
Car06g00753 230 Gene3D - 102 168 IPR014722 -
Car06g00753 230 CDD KOW_RPL6 104 230 IPR041997 -
Car06g00753 230 Pfam Ribosomal protein L6e 123 230 IPR000915 GO:0003735|GO:0005840|GO:0006412
Car06g00753 230 SUPERFAMILY Translation proteins SH3-like domain 104 170 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00753 Car-Chr6 7495237 7496802 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00753 3 230 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 73.617 2.78e-107 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00753 K02934 - gmx:100784101 350.132