Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00750 ATGAAAAGGGGATATGGGCCAAGAAGGCCCTTCGCAACAAGCATAACCCTATATCTACTAAACTCAGGGCTGACATTACTCCTGGGGACAGTGCTGGTTCATGTTTTTGGTAGATTTAAGGGAAAGAAGGTTGTGTTTTTGAAGCAGCTTCCTTCTGGGTTGCTTCTTGTAACTGATCCTTTCAAGTTTGACGGAGTTCCTTTGAGACGTGTAAATCAGTCATATGTGATGGGTACAACAACCAAAGTAGATATTTCTGCTGTTAATGTGGATAAATATGATGACAAGTACTTCAATTCCCGAAAAAGAAGAGCAAGGGAGAAGGCAAATTCTTTGAGACAGAAAACGAGGATAAAAAGGCATTGCCCCAGGAGAAGAAGGATAAGCCAAAAACTATGGAGTTGGTCTGTGATATATCTTTTGGACTTAAGAGAAAAAGGTATTTCCCCAGGAGATGAAGGATGA 465 0.4086 MKRGYGPRRPFATSITLYLLNSGLTLLLGTVLVHVFGRFKGKKVVFLKQLPSGLLLVTDPFKFDGVPLRRVNQSYVMGTTTKVDISAVNVDKYDDKYFNSRKRRAREKANSLRQKTRIKRHCPRRRRISQKLWSWSVIYLLDLREKGISPGDEG 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00750 154 Pfam Ribosomal protein L6e 64 131 IPR000915 GO:0003735|GO:0005840|GO:0006412
Car06g00750 154 Gene3D - 26 102 IPR014722 -
Car06g00750 154 SUPERFAMILY Translation proteins SH3-like domain 28 117 IPR008991 -
Car06g00750 154 PANTHER 60S RIBOSOMAL PROTEIN L6 27 131 - -
Car06g00750 154 PANTHER 60S RIBOSOMAL PROTEIN L6 27 131 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00750 Car-Chr6 7482476 7483966 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00750 25 98 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 72.973 1.85e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00750 K02934 - gmx:100784101 125.561