Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00748 ATGGACTACAATTTTGTAAACCCTCATCCTAATCCAAATTTTGTTCACTCTACTCATATGGTTCCTTCATCCCCTCATTTCATACTATCCGATTATCTTAGGCTTGATGATATTTTTATTGATCAAGAATCTCATTCACAAAGTATTGAATCGTTATATAAGGTAACATTTAGTCATGCCAATCAAGGATCCAATCATGCAACCTCTAAGAATAATAACATAAAATACAAAAATGGGATTAAGAGGAATAAAGGAGAAGTGGGGCCAAATATCGCCTTTAGAACGAGATCAGAGCTTGAAATTATGGATGATGGATATAAATGGAGAAAGTACGGAAAGAAGTCTGTGAAAAACAATCCCAACCTAAGGAACTACTACAAATGTTCAAGTTTGGGATGCAATGTGAAGAAAAGGGTGGAAAGGGATAGAGATGACTCGAGCTATGTGATAACAACTTATGAAGGTGTACACAACCATTGA 480 0.3542 MDYNFVNPHPNPNFVHSTHMVPSSPHFILSDYLRLDDIFIDQESHSQSIESLYKVTFSHANQGSNHATSKNNNIKYKNGIKRNKGEVGPNIAFRTRSELEIMDDGYKWRKYGKKSVKNNPNLRNYYKCSSLGCNVKKRVERDRDDSSYVITTYEGVHNH 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00748 159 PANTHER WRKY TRANSCRIPTION FACTOR 51-RELATED 1 159 - -
Car06g00748 159 Pfam WRKY DNA -binding domain 103 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00748 159 SUPERFAMILY WRKY DNA-binding domain 94 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g00748 159 Gene3D WRKY domain 90 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g00748 159 ProSiteProfiles WRKY domain profile. 97 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00748 159 SMART WRKY_cls 102 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00748 159 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 159 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00748 Car-Chr6 7466064 7469237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00748 6 159 WRKY Transcription Factor Family AT5G64810 46.951 3.81e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car06g00748 WRKY 1.6e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00748 - - cam:101494195 319.701