Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00740 ATGTCCCAAATTGTTAACAACAACTTATTTGAAGAGCAAAATCATGAGATTCCTACGCAAATGGGTTTCATTCCTTTCCAAACAAACCTAACCTTCCCTTCTTTGAAAGCATTCAATTCCATAGCTTCTTCACTTACGTCTGATTCAGATTCTACAATATCAAATCTAACACAAACCCTACTCACAACCAATCCACAAAAATCAAGACAATACCTCTCCCCAAACTTTGGAGAAACTCAATTCCTATCCTTGCATAGATCAAGTGTAAATCCATGGGCAATATTAGGAGGAGGAACAAGTGATTGCTTCAAGAGTGGTAAAAGAAGTGGATTAATACTTGATGATCATCATTTGGGGATTTCACCTATGAAGATGAAGAAAATGAAGGGAAGAAAGAAAGTGAGAGAGCCTAGGTTTTGCTTCAAGACTTTGAGTATTGATGTTGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTATGGACAAAAAGTAGTAAAGAACACACAACACCCCAGAAGCTATTACCGTTGCACAGAGGAGAATTGTGGTGTAAAGAAACGCGTGGAGCGGTTAGCAGAGGATCCAAGGATGGTAATAACCACATATGAAGGGAGACATGTACATACTCCATCCAATCATAATAATCTTTATGACTCTCCATCTCAATTTGACAATTTCTTTTGA 684 0.3801 MSQIVNNNLFEEQNHEIPTQMGFIPFQTNLTFPSLKAFNSIASSLTSDSDSTISNLTQTLLTTNPQKSRQYLSPNFGETQFLSLHRSSVNPWAILGGGTSDCFKSGKRSGLILDDHHLGISPMKMKKMKGRKKVREPRFCFKTLSIDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTEENCGVKKRVERLAEDPRMVITTYEGRHVHTPSNHNNLYDSPSQFDNFF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00740 227 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 45 214 - -
Car06g00740 227 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 214 IPR044810 GO:0003700
Car06g00740 227 ProSiteProfiles WRKY domain profile. 146 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00740 227 SMART WRKY_cls 151 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00740 227 SUPERFAMILY WRKY DNA-binding domain 146 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g00740 227 Pfam WRKY DNA -binding domain 152 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00740 227 Gene3D WRKY domain 137 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00740 Car-Chr6 7372607 7375485 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00740 120 213 WRKY Transcription Factor Family AT4G39410 82.979 1.56e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car06g00740 WRKY 7.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00740 - - gmx:732585 274.633