Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00734 ATGGGATGTGTAAACAGCAGGTACACTCCTCCACAAAACAAAAACCGAAGTCGCCATTTGAAACGAGAGAATGATCGGTATGTGAAGGTGGGAGTGGAGACTAAGAAGAGAGTGGTGTTTGTGAATAGTGGACATTATAAGACTTGTACTgaaggagaaggagatagagatagagatagagGTGATAAGACAAAGGTtgttgctgatgataagtctgaggagagtgataagaagaagaatatgaggatgatgatgatTGCAAACTATGAAGTTAAAGTGGGTGACGGTGACTGGCCAAAATGGCTTGTTGATAATATTCCTCAAAACGTTTTGTCTACTTTGATTCGCAAGACTGCTGATTCTTATGAAAAACTAGGAAAGGTAGGACGTGGAACATATAGCAATGTATATAAAGCCAGAGATAAGGACAGTGGAAAGATAGTTGCTTTGAAGAAAGTAAGATTTGACACATCAGATTCTGAAAGCATAAAGTTTATGGCAAGAGAGATCATGATACTACAGACACTAGATCATCCCAATGTCATCAAACTTGAAGGATTAGCAACATCAAGAATGCAATATAGTCTTTATCTAGTCTTTGAATACATGCAATGTGACCTCACTAGAGTTATTTCTCGCCCTGAAGAAACACTCACTCAACCACAGATCAAATGTTACATGCAACAACTACTTTTGGGACTCCAACATTGTCATGAGAGGGGAGTTATGCACCGAGATATTAAAGCTTCAAATTTGTTAATAGATAAAAGAGGGGTGCTAAAAATAGCAGATTTTGGGCTTGCAAATTCAATAAAAATAAAACCTAAAGGGCCTCTTACAAATAGAGTTGTGACACTTTGGTATAGAGCTCCTGAACTTCTTTTAGGTTCAACTGATTATGATTATAGCATTGATATATGGAGTGTAGGTTGCTTGTTGGCTGAGATGTTTGTGGGAAGGCCAATTATGCCTGGGAGGACTGAGATTGAACAGCTACATCTGATCTACAAACTTTGTGGTTCACCTTCAGAAGATTACATGACAAAAATGAAGCTGAGGACAAGTTTCCGTCCACCACAACGTTATAAAGCTAGTTTTCAAGAAAACTTTCGAGATTTTCCTTTATCTGCCCTTAATCTCTTGACTACACTTCTTGATTTGGACCCACAACATCGTGGCACTGCTGCCTCTGCTCTTGAAACTGAATTCTTCAAATCTTTTCCATTAGCATGCGACATTTCAGAACTACCGATAGTGGTCAACAAAGGTGATGATGAACACACACAAAATAAGAGACGAAAAAGGCGCAAAGGTTTGAAAAAAGGGAAACTATCCAAAAGAAGTGCAAGCAATATAAGCCTGTCAGAAATGAAACAAGCTGCTGAACAATGCAAGACAGATTCAGAACTATCAAAGGAGGAGAAGAGTATAGGACAAAACATGCTAGGATCAGAAACGGGAAATAGTGGAAGCAGCAGCAAATCATCATCAATATTTACTAGCGAACGGAGCATGAATGCATCTATATCTCCAGTTTTTCTCTCTAGCAAGAGAATATCTCCCAAAACTGAAGGCCATCCTAATGCTCTAAAGAATATAAAGAACTACACACTCTTACAGGCATCTATACTTGATATGATCAACCCTAGTGAAGGCAATGATTTTGGTCAGTTTCGTAGGTCCATCTCTACGTTGGATTTTCGGCTTGATCCAGAGAAGCTATCAAGCCTCTACGGATCAAATAAGTCGAACCATGAAGTGTGA 1764 0.3696 MGCVNSRYTPPQNKNRSRHLKRENDRYVKVGVETKKRVVFVNSGHYKTCTEGEGDRDRDRGDKTKVVADDKSEESDKKKNMRMMMIANYEVKVGDGDWPKWLVDNIPQNVLSTLIRKTADSYEKLGKVGRGTYSNVYKARDKDSGKIVALKKVRFDTSDSESIKFMAREIMILQTLDHPNVIKLEGLATSRMQYSLYLVFEYMQCDLTRVISRPEETLTQPQIKCYMQQLLLGLQHCHERGVMHRDIKASNLLIDKRGVLKIADFGLANSIKIKPKGPLTNRVVTLWYRAPELLLGSTDYDYSIDIWSVGCLLAEMFVGRPIMPGRTEIEQLHLIYKLCGSPSEDYMTKMKLRTSFRPPQRYKASFQENFRDFPLSALNLLTTLLDLDPQHRGTAASALETEFFKSFPLACDISELPIVVNKGDDEHTQNKRRKRRKGLKKGKLSKRSASNISLSEMKQAAEQCKTDSELSKEEKSIGQNMLGSETGNSGSSSKSSSIFTSERSMNASISPVFLSSKRISPKTEGHPNALKNIKNYTLLQASILDMINPSEGNDFGQFRRSISTLDFRLDPEKLSSLYGSNKSNHEV 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00734 587 PANTHER CYCLIN-DEPENDENT KINASE 73 543 - -
Car06g00734 587 Gene3D Transferase(Phosphotransferase) domain 1 205 444 - -
Car06g00734 587 MobiDBLite consensus disorder prediction 424 502 - -
Car06g00734 587 MobiDBLite consensus disorder prediction 49 78 - -
Car06g00734 587 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Car06g00734 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Car06g00734 587 Pfam Protein kinase domain 122 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00734 587 ProSiteProfiles Protein kinase domain profile. 122 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00734 587 MobiDBLite consensus disorder prediction 475 502 - -
Car06g00734 587 PANTHER CELL DIVISION PROTEIN KINASE 73 543 - -
Car06g00734 587 MobiDBLite consensus disorder prediction 1 26 - -
Car06g00734 587 Gene3D Phosphorylase Kinase; domain 1 110 204 - -
Car06g00734 587 SUPERFAMILY Protein kinase-like (PK-like) 116 410 IPR011009 -
Car06g00734 587 MobiDBLite consensus disorder prediction 446 461 - -
Car06g00734 587 SMART serkin_6 122 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00734 Car-Chr6 7311680 7318025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00734 117 446 Core Cell Cycle Gene Families AT5G10270 46.264 8.36e-95 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Car06g00734 Pkinase 1.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00734 K08819 - gmx:102667260 695.656