Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00710 ATGAATGTGATGGATTATGAGCAATTTGATTACTCATTTACCCCTCCCTACCTAAATCAGCTGCATGAGTGTACCTTAGAAAATTCATCGCCATCCCAAACAGAACATCTCTTATCTCCAAATACAATCCTAGATGAAATATTGTTTGATAATACCATCCTAGATGAAATCTTTGATCAAAATTCCATAGAAGGATTGCTACAGCAACATAAAAACCATGAATTCGATATCGTAAATCATGAAGAGACAATAATGGCTCCAGGGAATGAATTGTATCATGAGAAAGGCTGCGAAAATATGGTTGTTTCAATGGAAACAGATTCTTGTTGGAAGGAAGTTCAAGAAGAGTTAATGGAAGAGACTAGTTTAGTTGATCTTTTACTGACAGGAGCTGAAGCTGTTGAAGCTCAGAACTTTAATCTTGCTTCTGACATAATTGAGAAACTAAACAATGCTTCATCTTTGGAAAACGGAGATAATAGTTTATTGAAAAGGTTGGCTATTTTCTTTACAAAGGGTTTGTATTATAAAACTACAAATGCTCCTGAATTCCATTGGGATCATGTTTCTACACAGACAAAAAGTTTCTGTGTGTTTCAGATACTTCAGGAACTTTCACCCTATGTAAAATTTGCTCATTTCACAGCAAACCAAGCAATTTTCGAAGCTACGGAAGGTGTTAACGATGTTCATGTCATTGATTTTGACATCATGGAAGGAATCCAATGGCCATCGTTAATGGTTGACCTTGCAATGAGGAAGAACACTACTTCCCTTAGAGTAACAGCAATCACAGGGGATCAGCAAAGTGCAGCCTCAGTTCAACAAACAGGAAGACGGCTCAAAGAGTTCGCGGATTCAATCAATTTTCCATTTGTGTTCGATCAGATGATGATGGCAGGCGAAGAAGATTTTCGAGGAATTGAACTCGGTCATACAGTTATTGTCAATTGTATGATACACCAGTGGATGCCCAACAGGAGTTTCTCATTGGTCAAAACTTTTGTTGATGGTGTTATCAAATTATCACCAAGGCTTGTTGTTTTAGTTGAAGAAGAATTGTTTAATTTTTCTAGACTCAAATCTATGTCCTTTGTGGAATTCTTCTGTGAGGCTTTGCATCACTATATTGCACTTTCTGATTCACTTGTTAGTACTCTGTTGAGAAGTCATAAGATGGAGTTAAACCTTATAGAGAAAGAGGTCTTGGGGGTTAGAATCTTAGACAGTGTAAGACAGTTTCCTTGTGAAAGAGAAGAGAGGATATTGTGGGAAGAAAGGTTTTATTCTTTGAAAGGGTATAAACGTGTTGGTATGAGTACATGTAATATTTCACAGGCTAAGTTTTTGATTAGCTTGTTTGGTAAAGGGTATTGGGTGCAATTTGAGAACAGTAAGTTGGCTTTGTGTTGGAAATCAAGACCTTTGACTTCAGTTTCAATCTGGGAACCAACAGCTTATATGAGTGATAAGGGCAAATAG 1482 0.3698 MNVMDYEQFDYSFTPPYLNQLHECTLENSSPSQTEHLLSPNTILDEILFDNTILDEIFDQNSIEGLLQQHKNHEFDIVNHEETIMAPGNELYHEKGCENMVVSMETDSCWKEVQEELMEETSLVDLLLTGAEAVEAQNFNLASDIIEKLNNASSLENGDNSLLKRLAIFFTKGLYYKTTNAPEFHWDHVSTQTKSFCVFQILQELSPYVKFAHFTANQAIFEATEGVNDVHVIDFDIMEGIQWPSLMVDLAMRKNTTSLRVTAITGDQQSAASVQQTGRRLKEFADSINFPFVFDQMMMAGEEDFRGIELGHTVIVNCMIHQWMPNRSFSLVKTFVDGVIKLSPRLVVLVEEELFNFSRLKSMSFVEFFCEALHHYIALSDSLVSTLLRSHKMELNLIEKEVLGVRILDSVRQFPCEREERILWEERFYSLKGYKRVGMSTCNISQAKFLISLFGKGYWVQFENSKLALCWKSRPLTSVSIWEPTAYMSDKGK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00710 493 ProSiteProfiles GRAS family profile. 114 483 IPR005202 -
Car06g00710 493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 483 IPR005202 -
Car06g00710 493 Pfam GRAS domain family 123 483 IPR005202 -
Car06g00710 493 PANTHER OS12G0162700 PROTEIN 5 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00710 Car-Chr6 7107153 7108916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00710 197 483 GRAS Transcription Factor Family AT1G55580 36.013 2.94e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car06g00710 GRAS 7.1e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00710 - - gmx:100804613 704.131