Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00708 ATGAGTTTGGCCGGCACGGAAAGCTCGGAAGAGGGTGCAGGGCATCCGGAGCCACCTGATCCTGATGTTCTCGAAATTGATCCTACTTGTCGCTACATCAAGTATAAAGAAGTGATCGGCAAAGGAGCCTTCAAAACTGTTTACAGGGCATTTGATGAGGTCCATGGAATTGAAGTTGCATGGGGCCAGGTTCAGATTGATGAGGTGTTACAGTCACCGGGTGACTTAGATAGGCTATACTCGGAAGTGCTTCTCTTAAAATCGCTGAGGCACAATAACATAGTAAAATTCTACAATTCTTGGATCGATGACAAGCGCAAAACTGTTAATATGATTACTGAGCTATTTACCTCGGGTAGCCTCAAACAGTATCGCAAAAAACACAAGAAGATTGACATGAAGGCAGTCAAAAGATGGGCAAGACAGATTCTAATGGGTTTAAACTACCTCCACAGTCATAACCCACCAATTATACATAGGGACTTGAAATGTGATAATATATTTATCAATGGTCACCAAGGAGAAGTTAAAATTGGAGATTTGGGGCTAGCGACTTCCTTGACAAAGGCTAATGCCAAGAGTGTTATTGGAACTCCGGAGTTTATGGCACCTGAGATGTATGACGAAAATTACAACGAATTAGCTGACATATATTCATTTGGTATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCTTACAGTGAGTGCAGAAACTCGGCACAGATATACAAGAAGGTTTCATCTGGTATAAAGCCCGTTGCTCTTTCTAAAGTGATAGATCCAGAGATAAAATCATTCATCGAGAAATGTCTTGTTCCAGCATCCCAAAGATTGTCGGCAAAGGATCTTCTGATGGATCCCTTTGTTCAAGTGAATGGTTCAACAAAAAGCATTTCTTTTCCATTGCCGGATATTGTCTTTCGCAAATTGGGAGCCACTGAAAACAGATGTATGATGTCAGAAGGTCCTGCTAGTGCACGTAATGGGGCCATTTCTATGGATCTTGGTGACACTAACGAGCTTCCTGTAATTACTGTACTTGGTAATTCCAAAGTTGATGCATCATGTTCTCGAAGTGTTGAAATACGAAGGTTGAAGGGAGGTGATACCTTCTTTCTAAAAGGTGATGGAAATGATGAGAACTCTGTATCATTAGTTCTGCGGATAGCTGATCAAAGTGGACAAGCAAGAAATATCCATTTCATCTTCTACCTTGACAGTGATACTGCTGTCTCAGTTTCAAGCGAAATGGTTGAGCAACTTGAACTTTCTGATCAGAATGTAAAATTTATAGCTGAGTTAATCGATTTGTTGTTGATGAATTTGGTTCCTGAATGGAAACCTTGTGTAGCAATTGATAATTTGGTTTCTGTAAATGGTAAATGGACTAATGCTAGCCAACAACGAGATGCGGAGTTGGCTAAAGACAAAGGAAACTCAAAACATTATGCTGAAAATGTGGCTGAAGATGCAGGTCCCTCAACCTCATTTGGAAGATTGGCTGCAAAAGGGAGCTTCGACAATATGGATTTGTGTTCTGAGATGTCCTATGCTTCTGCAACATCAGACATCAATGATAAGTTTTCTATGGTTTCATTTATGTCTGCTGAATCAGGATTTGATGGAGTGAGTCTTAGCTCGTTTGCATCTGAAACTGGGGAAGCAATTGATTATAGAAGCAAGTTTTTCGACACGGGAAGCAGCAGTGTGATGAGCATCTCAAGTTATCCTATTAGTGTTTCCTCCTTGTCTGAACCTGATGATGAGTTGAGAGCAGAGTTAGAAATTATTGAACAGAAATATCAAGAGGCAATTAGCGATTTATCCAGAAGAAGAAACCTGGCCATCGAGGAGATTAAAAAGAGAATGTCAGAGAAGATAGTATCATAG 1893 0.4057 MSLAGTESSEEGAGHPEPPDPDVLEIDPTCRYIKYKEVIGKGAFKTVYRAFDEVHGIEVAWGQVQIDEVLQSPGDLDRLYSEVLLLKSLRHNNIVKFYNSWIDDKRKTVNMITELFTSGSLKQYRKKHKKIDMKAVKRWARQILMGLNYLHSHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATSLTKANAKSVIGTPEFMAPEMYDENYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSKVIDPEIKSFIEKCLVPASQRLSAKDLLMDPFVQVNGSTKSISFPLPDIVFRKLGATENRCMMSEGPASARNGAISMDLGDTNELPVITVLGNSKVDASCSRSVEIRRLKGGDTFFLKGDGNDENSVSLVLRIADQSGQARNIHFIFYLDSDTAVSVSSEMVEQLELSDQNVKFIAELIDLLLMNLVPEWKPCVAIDNLVSVNGKWTNASQQRDAELAKDKGNSKHYAENVAEDAGPSTSFGRLAAKGSFDNMDLCSEMSYASATSDINDKFSMVSFMSAESGFDGVSLSSFASETGEAIDYRSKFFDTGSSSVMSISSYPISVSSLSEPDDELRAELEIIEQKYQEAISDLSRRRNLAIEEIKKRMSEKIVS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00708 630 Gene3D - 382 461 - -
Car06g00708 630 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00708 630 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00708 630 SUPERFAMILY Protein kinase-like (PK-like) 35 291 IPR011009 -
Car06g00708 630 CDD STKc_WNK 31 289 - -
Car06g00708 630 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Car06g00708 630 Gene3D Transferase(Phosphotransferase) domain 1 116 297 - -
Car06g00708 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 497 - -
Car06g00708 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 511 628 - -
Car06g00708 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Car06g00708 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 511 628 - -
Car06g00708 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 497 - -
Car06g00708 630 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00708 630 MobiDBLite consensus disorder prediction 1 24 - -
Car06g00708 630 Coils Coil 588 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00708 Car-Chr6 7099756 7103094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00708 22 623 MAP Kinase Kinase Kinase AT5G41990 46.600 1.87e-166 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car06g00708 Pkinase 2.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00708 K08867 - gmx:121175054 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00708 06 7099756 7103094 Car05g02475 05 69848293 69851424 PCT