Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00706 ATGGTGAGAGTTAGTGTTTTGAACGATGCTCTTAAGAGCATGTACAATGCTGAGAAACGTGGAAAGCGTCAAGTTATGATTCGTCCATCATCCAAAGTCATTATCAAATTCCTTTTGGTTATGCAAAAGCACGGATACATTGGAGAGTTTGAATATGTTGATGACCACAGATCTGGAAAGATTGTTGTTGAATTGAATGGTAGGCTGAATAAATGTGGTGTTATTAGTCCTCGTTTTGATGTTGGTGTCAAAGAAATTGAAGGTTGGACTGCTAGGCTTCTTCCTTCCAGACAGTTTGGGTACATTGTTTTGACAACCTCTGCTGGCATTATGGACCACGAAGAGGCTAGGAGAAAGAATGTCGGTGGAAAGATTGTCACTTTTTATCAAGCAGAAGAAAGATTAATTTATACTGAATATTTGAGGATTGGGTTCTTGGTGTATGTTGTACCTGTTTTGGAGATAATTCATAATAATCTTGATAAATTTAGCGTTATCTGGTTGATGGCATGGGAAACATTACGGATTGCAGAAACAGTTTTAAAGGCAGTGTACATTCCTGTGCTTCCCCTGATACGGGTGGGGTTTTGTGTTGTTCTTAACTTGTTGGAAGTTGTTGGACAGTCTTCAAACTGTTTCAGCATGATGGTGCCTATGGTTGTGGTTGCCTAA 672 0.3929 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKIVTFYQAEERLIYTEYLRIGFLVYVVPVLEIIHNNLDKFSVIWLMAWETLRIAETVLKAVYIPVLPLIRVGFCVVLNLLEVVGQSSNCFSMMVPMVVVA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00706 223 Pfam Ribosomal protein S8 7 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Car06g00706 223 Gene3D - 1 69 - -
Car06g00706 223 PANTHER BNAA02G06730D PROTEIN 1 129 - -
Car06g00706 223 Gene3D - 70 129 - -
Car06g00706 223 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
Car06g00706 223 SUPERFAMILY Ribosomal protein S8 4 127 IPR035987 GO:0003735|GO:0005840|GO:0006412
Car06g00706 223 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00706 Car-Chr6 7084785 7086514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00706 1 129 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 95.349 5.86e-90 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00706 K02957 - pvy:116105248 253.062