Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00700 ATGGCTTCTCTCTTTACTTTCACTCTTTTCATTTTCTTCACACTCTCCACCGCCTCTCGCAGCCACAAGCACCATTctcccactcccgctcccactcccaccctctctcccacCGCCGTGCCGGATATTCAACAAGCCTGCAAAGCCACACGCTTCCCACAACAATGCGAATCATCTctctcaaatctccctccaaatccaaccactctccaacttctccaatccgcaatctccctctccTCCGACAATCTCGTAACTGCCAAATCAATGGTTAAATCCATTCTCGACTCCTCTTCCACCAGCCGCAACCGTACCGTCGCCGCCACAACCTGCATCGAAGTCCTCACTAATTCACAACACCGCATTTCCCTCTCTCAAGACGCACTGCCACGTGGCAGAACAAAAGACGCCCGAGCATGGCTTAGCGCTGCCCTCGCTTACCAGTATGATTGCTGGAACGGACTCAAGTACGCAAACGACACACGCGCCGTCGGCGAAGCGATGTCGTTTATAGATTCCCTCTCAATGCTCTCGAGCAACGCACTCGCCATGGCGTTTTCTTACGACGTTTACGGAAACGACACGTCGTCGTGGAAACCGCCTTCTACGGAGCGCAACGGTTTCTGGGAAGCGTCTGGATCAGGCGGAGGATCTGATTTCAAGGGAGGGATTCCGTCGACTTTGACGCCGGATGTAACGGTGTGTAAGGGAGGAGAGAATAAGTGTTATAAGACGGTGCAAGAAGCGGTTAACGCTGCGCCGGATAACAGCGTTGAAGGGAAGAGGTTTGTGATATATATAAAAGAAGGGGTATATGAGGAAACCGTTAGGGTTCCGTTAGAGAAGAGGAATGTGGTGTTCTTGGGCGACGGTATGGGGAAGACGGTTATCACCGGGTCTGCTAACGTGGGACAGCCCGGAATGACTACTTACAATTCAGCCACAGTCGCGGTTATTGGGGATGGTTTCATGGCAAAGGATCTAACAATCCAAAACACAGCAGGTCCTGATGCTCACCAAGCAGTGGCAGTCAGAGTAGACAGTGATCTTTCTGTCATTGAGAATTGTGAATTCATAGGCAATCAAGATACTCTTTATGCTCATTCCCTTCGCCAATTTTACAAATCATGCCGCATTATCGGCAACGTCGATTTCATCTTTGGAAACTCAGCTGCAATCTTCCAAGATTGTCAAGTCCTTGTCCGTCCTCGGCAACTCAAACCAGAGAAAGGCGAGAACAATGCCATCACAGCTCACGGCAGAACCGACCCTTCACAAACTACAGGCTTTGTTTTTCAAAACTGCTTGATTAATGGAACTGAAGATTACATGGCATTGTATCATAACAACCCTAAAGTGCACAAAAACTATTTGGGCAGGCCATGGAAGGAGTATTCTAGAACAGTTTTTATTCATTCAGTCTTGGGAGAACTTGTTACACCTCAGGGTTGGATGCCATGGAGTGGTGACTTTGCACTCAAGACACTTTATTATGGGGAATTTGATAATTCTGGAGAAGGTTCTGATTTGTCTCAAAGGGTATCTTGGAGCAGCAAAATCCCTGCTGAACATGTGTTAACTTATTCAGCGGATAATTTCATTCAAGGAGGTGAATGGATTTCACCATCTCTGTTATCAGCTCATCAGTAA 1650 0.4467 MASLFTFTLFIFFTLSTASRSHKHHSPTPAPTPTLSPTAVPDIQQACKATRFPQQCESSLSNLPPNPTTLQLLQSAISLSSDNLVTAKSMVKSILDSSSTSRNRTVAATTCIEVLTNSQHRISLSQDALPRGRTKDARAWLSAALAYQYDCWNGLKYANDTRAVGEAMSFIDSLSMLSSNALAMAFSYDVYGNDTSSWKPPSTERNGFWEASGSGGGSDFKGGIPSTLTPDVTVCKGGENKCYKTVQEAVNAAPDNSVEGKRFVIYIKEGVYEETVRVPLEKRNVVFLGDGMGKTVITGSANVGQPGMTTYNSATVAVIGDGFMAKDLTIQNTAGPDAHQAVAVRVDSDLSVIENCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSAAIFQDCQVLVRPRQLKPEKGENNAITAHGRTDPSQTTGFVFQNCLINGTEDYMALYHNNPKVHKNYLGRPWKEYSRTVFIHSVLGELVTPQGWMPWSGDFALKTLYYGEFDNSGEGSDLSQRVSWSSKIPAEHVLTYSADNFIQGGEWISPSLLSAHQ 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00700 549 PANTHER PECTINESTERASE 37 543 - -
Car06g00700 549 CDD PMEI-like_3 46 184 - -
Car06g00700 549 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 37 543 - -
Car06g00700 549 SUPERFAMILY Pectin lyase-like 226 544 IPR011050 -
Car06g00700 549 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 184 IPR035513 -
Car06g00700 549 TIGRFAM PME_inhib: pectinesterase inhibitor domain 3 184 IPR006501 GO:0004857
Car06g00700 549 Pfam Plant invertase/pectin methylesterase inhibitor 43 184 IPR006501 GO:0004857
Car06g00700 549 Gene3D - 225 547 IPR012334 -
Car06g00700 549 SMART PMEI_2 38 184 IPR006501 GO:0004857
Car06g00700 549 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 187 IPR035513 -
Car06g00700 549 Pfam Pectinesterase 231 536 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00700 Car-Chr6 7014123 7017380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00700 43 543 Carbohydrate Esterase AT5G09760 66.863 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00700 - - adu:107480269 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00700 06 7014123 7017380 Car05g02482 05 69957926 69960250 PCT