Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00698 ATGGAAACAAATGAACAACACAACAATAATAATATTATTCTTGAAGATGATCATCATCAAATTCCTATAAGTTCTTCAATGATTTGGCAAAACTACAACATGATGGGAGCACAACCACCATCTTCATCAGGTTCACTAAGTGATATATTAGGGATCCACCAAGAAAATCATGATGAAGAACAAGAAGAAGAGTTAGGAGCTATGAAAGAGATGATGTACAAGATTGCAGCTATGCAACCAGTGGACATCGATCCCACAACTATTCGAAAACCGAAGCGAAGAAACGTTCGAATTAGCGACGATCCACAAAGCGTTGCGGCTAGACATCGAAGAGAAAGAATAAGTGAGAAAATTCGTATACTTCAAAGACTTGTTCCTGGTGGAACTAAAATGGATACAGCTTCTATGCTTGAAGAAGCTATTCGTTATGTTAAGTTCTTGAAGAGACAAATTAGGTTGCTTCAATCCACTCCTCAAACTCAACAACAACAATTATTACCACTTTCACAATGCATTTCTACTACTTCTACTAGTGCTTTCTTGTTATCCCCTTCTTTAGGTTGTGAATGGCCTTTTGCACCAAATTTACTACTCACTTCCACAACCACCACGGCCGAGTTACCCGCCGGAGTTCCATTTCAAGCCGGAGGAAATTCAGATGTCCATGCTTGTGATGGCTCATCAAGTTTTAATCATCATGAGGTAATTAGTGAATAA 717 0.3863 METNEQHNNNNIILEDDHHQIPISSSMIWQNYNMMGAQPPSSSGSLSDILGIHQENHDEEQEEELGAMKEMMYKIAAMQPVDIDPTTIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLEEAIRYVKFLKRQIRLLQSTPQTQQQQLLPLSQCISTTSTSAFLLSPSLGCEWPFAPNLLLTSTTTTAELPAGVPFQAGGNSDVHACDGSSSFNHHEVISE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00698 238 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 51 205 - -
Car06g00698 238 Gene3D - 101 169 IPR036638 GO:0046983
Car06g00698 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 98 147 IPR011598 GO:0046983
Car06g00698 238 Pfam Helix-loop-helix DNA-binding domain 108 147 IPR011598 GO:0046983
Car06g00698 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 103 167 IPR036638 GO:0046983
Car06g00698 238 SMART finulus 104 153 IPR011598 GO:0046983
Car06g00698 238 CDD bHLH_AtIND_like 99 153 - -
Car06g00698 238 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 51 205 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00698 Car-Chr6 6977377 6978093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00698 65 175 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 79.130 2.38e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car06g00698 HLH 2.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00698 - - aprc:113856609 278.87