Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00691 ATGGCTATATCGAAATTGATACCTGGATTTCGATTCCATCCAACTTCTGTTGAATTGGTGAAGTACTTTCTGCAAAGGAAAGTGATGGGAAAAAAGTTTCATGATGATGTCATTGCTGAACTTGACATATACAAATATGCTCCTTGGGATCTCCCAGACAAATCTTATCTGAAAAATGGGGATTTAGAATGGTTCTTCTTCTGTCCGATTGAGAAGAAATATGGAAGTGGGATGAGGTTGAATCGAGCTACTGAATTTGGATTTTGGAAAGCTACTGGTAAGGATAGAGCTGTTCAGCACAATAACCAAACTGTGGGGATGATAAGAACTTTGATATTTCACACTGGAAAAGCACCTCGTGGTGATCGAACGGATTGGGTTATGCATGAGTATAGGCTTGAAGATAAGGACCTTGCTCACAAAGGAATTGTTCAGGATTCCTATGTAATCTGTAAGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCGCAATATGGTAGACCATTTAACGAGGAAGATTGGAGTGATGATGAAGTGGGAATACCTTTTGCCGCATCGGCTGCACTAGTTCCCAGTTTGCGCGTGACACCTAATAGTTCTGTTCCAAATGACCAGGCTCTCCATGCTAGTGGATCTAATGGTTCAATATCCACTTCATGTCAATCAGGATTGGTGCCTTCTCCCAACCCAGTAAATCATTCATATCCAGACAACCAAGCTGTTAATAATGATAATGATGATATTTTATCAATGCATGATATTTTCAAAGACAATGACATATTGCCCGAGGAAAATATGGCTGAAGGGGCACTTTTAAGTGACTTTTTTGAGGGTTTGGGAAACCTGGATTCCTCGGCTTTGTTCGGTGGTATATCCTTTGGCCAGAATGCTGAGTTTAGCACAAATGAAATGACTACTACTGGTGATGTCTTGGAGCACGGCATCATGGATTTTTTGGAGTTGATTGATCTAGACTCTTCGTTGTTGTGGCAGAGTACTACCCAACGGGAAAGTTGGAGTTGA 1029 0.413 MAISKLIPGFRFHPTSVELVKYFLQRKVMGKKFHDDVIAELDIYKYAPWDLPDKSYLKNGDLEWFFFCPIEKKYGSGMRLNRATEFGFWKATGKDRAVQHNNQTVGMIRTLIFHTGKAPRGDRTDWVMHEYRLEDKDLAHKGIVQDSYVICKVFQKEGPGPRNGAQYGRPFNEEDWSDDEVGIPFAASAALVPSLRVTPNSSVPNDQALHASGSNGSISTSCQSGLVPSPNPVNHSYPDNQAVNNDNDDILSMHDIFKDNDILPEENMAEGALLSDFFEGLGNLDSSALFGGISFGQNAEFSTNEMTTTGDVLEHGIMDFLELIDLDSSLLWQSTTQRESWS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00691 342 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Car06g00691 342 MobiDBLite consensus disorder prediction 203 245 - -
Car06g00691 342 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Car06g00691 342 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 239 329 - -
Car06g00691 342 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 234 - -
Car06g00691 342 PANTHER PLANT NAC DOMAIN PROTEIN 1 234 - -
Car06g00691 342 PANTHER PLANT NAC DOMAIN PROTEIN 239 329 - -
Car06g00691 342 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Car06g00691 342 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00691 Car-Chr6 6924880 6927635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00691 1 337 NAC Transcription Factor Family AT5G09330 45.404 4.92e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g00691 NAM 4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00691 - - mtr:MTR_8g093580 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00691 06 6924880 6927635 Car05g02493 05 70065340 70068659 PCT