LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car06g00683	ATGTCTGGTGAAGAAGGTGTTGTTGCAGTCGAACCAGTTGTTGCTGCTGCGGCTGCTATTCCTGGTGAGCCAATGGATATCATGACTGCTGTTCAGCTTGTGCTGAGAAAGTCCCGGGCTTATGGTGGCCTTGCACGAGGTCTTCATGAAAGCGCAAAGGTGATTGAGAAGCACGCTGCTCAACTCTGTGTTCTAGCTGAAGACTGTGACCAACCTGATTATGTCAAGTTGGTGAAAGCCCTTTGCGCAGAGCACAATGTTAGCTTATTGACTGTTCCAAATGCAAAGACCCTTGGAGAGTGGGCTGGTTTGTGTAAGATTGATTCAGAGGGTAAAGCTAGGAAGGTAACTGGCTGCTCCTGCGTGGTTGTCAAGGATTTTGGTGAAGAGCACGAAGCATACAATGTTGTTTTGCAGCACGTGAAATCTAACTGA	435	0.4782	MSGEEGVVAVEPVVAAAAAIPGEPMDIMTAVQLVLRKSRAYGGLARGLHESAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPNAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKSN	144

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car06g00683	144	SUPERFAMILY	L30e-like	24	142	IPR029064	-
	Car06g00683	144	Pfam	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	30	123	IPR004038	-
	Car06g00683	144	PRINTS	Ribosomal protein S12E family signature	34	47	IPR000530	GO:0003735\|GO:0005840\|GO:0006412
	Car06g00683	144	PRINTS	Ribosomal protein S12E family signature	48	64	IPR000530	GO:0003735\|GO:0005840\|GO:0006412
	Car06g00683	144	PRINTS	Ribosomal protein S12E family signature	89	110	IPR000530	GO:0003735\|GO:0005840\|GO:0006412
	Car06g00683	144	PRINTS	Ribosomal protein S12E family signature	114	127	IPR000530	GO:0003735\|GO:0005840\|GO:0006412
	Car06g00683	144	PANTHER	40S RIBOSOMAL PROTEIN S12	1	144	IPR000530	GO:0003735\|GO:0005840\|GO:0006412
	Car06g00683	144	Gene3D	-	11	144	IPR029064	-
	Car06g00683	144	PANTHER	40S RIBOSOMAL PROTEIN S12	1	144	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car06g00683	Car-Chr6	6854684	6856612	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car06g00683	20	144	Cytoplasmic Ribosomal Protein Gene Family	AT2G32060	75.200	8.42e-68	200

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car06g00683	K02951		-	gmx:100786733	251.521