Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00681 ATGTTGGGGAGTGAAAATATGAAGCTTCCACCTGGGTTTTACTTTTCTCCAACGGATGAAGAACTTGTTCTTCATTTTCTATATTCTAAGGCTTCTAATTTACCATATCATCCTAACATCATACCTCATCTTCATTTGTCTCATATTGATCCTTGGGAACTATACGGTAAAGCGTTATCAAGTGGAAATGAACACTACTTGTTCACGGAAGTAAAGGAAAGTAGATCAAATGAAAATGGATACTGGAAAGAAATAGGGGCTACAAAAGCTATAGTTTCAGCTGCTAATAATATATTGGGGATGAAGAAGTATCTTGTGTTCACTCTTAGGGAAGGAACACAAACCAATTGGATAATGGAAGAGTATCATATTTCTTCATCCACATCTCCAATTAATCTTGAAGAGAGTTGGAGCAAATGGGTTTTATGCAAAGTGTATGAAAAGAAGATGTCACAAATGTCCCAACAAGTTTGTTATAGCGATGAGGATGTTGACAGTGGAACAGAGGTGTCATGGTTAGATGAAGTTTTCATGTCCTTAGATGATGATCTTGATGAGACAAGCCAACCTAATTAA 576 0.3646 MLGSENMKLPPGFYFSPTDEELVLHFLYSKASNLPYHPNIIPHLHLSHIDPWELYGKALSSGNEHYLFTEVKESRSNENGYWKEIGATKAIVSAANNILGMKKYLVFTLREGTQTNWIMEEYHISSSTSPINLEESWSKWVLCKVYEKKMSQMSQQVCYSDEDVDSGTEVSWLDEVFMSLDDDLDETSQPN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00681 191 Pfam No apical meristem (NAM) protein 10 124 IPR003441 GO:0003677|GO:0006355
Car06g00681 191 ProSiteProfiles NAC domain profile. 9 148 IPR003441 GO:0003677|GO:0006355
Car06g00681 191 SUPERFAMILY NAC domain 5 148 IPR036093 GO:0003677|GO:0006355
Car06g00681 191 PANTHER NAC TRANSCRIPTION FACTOR 56 5 188 - -
Car06g00681 191 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 188 - -
Car06g00681 191 Gene3D NAC domain 18 154 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00681 Car-Chr6 6832567 6834406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00681 2 152 NAC Transcription Factor Family AT1G61110 37.572 3.48e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g00681 NAM 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00681 - - mtr:MTR_8g093790 286.96