Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00679 ATGAAGATTCAAGGATGCGAAGTTGAAGCCATTGGCATCAACTACAAAATCCACACAAACAAAGCAGAACACCCTTTTAAAATCTTCAGCAAATCACCTCAACAATTAGATACCAaagaaacagaagaagaagaagaagaggaagcaagaGGTGAAAAAAGTTGCAGTGGAGTTAGACATGTGTTAAAGAATGTGAGTTGTCAAGCAAAACCATGGGAAATTCTAGCAATTGTTGGACCAAGTGGAGCTGGAAAATCAACACTGCTTGAGATCTTAGCAGGTAAGCACAGTCCACAAAAAGGGTCAGTGTTGTTGAACCAAAAGCCAGTGGACAAAGCTCAGTTCAGAAAGCTATCAGGTTATGTTGCTCAAAAGGACACTTTGTTTCCTTTACTTACAGTTGAAGAAACCATGATGTTCAGTGCAAGGCTAAGGCTAAAGCTACCTCAACAACAACTATGTTCAAGGGTCAAGTTACTGGTTCATGAACTTGGACTGGACCATGTTTCCGGGACTCGAATCGGCGACGATAGAGTCCGAGGTATATCCGGTGGTGAAAGGCGAAGAGTTTCTATTGGTGTTGAAGTTATACATGATCCTAAAGTGTTGATTCTTGATGAACCAACTTCAGGGCTTGATAGTACCTCAGCTTTGCAAATAATTGATATGCTTAAGGTTATGGCTGAAACTAGAGGAAGAACTATAATACTTAGTATACATCAACCTGGTTTCAGAATAGTGAAGCTGTTCAATTCATTGTTGTTGTTAGCTAATGGTTCTGTTTTACACCATGGAACTTCAGATTTACTTAGTTTAAATCTGAGATTAATGGGTCTAGAGCTTCCACTTCATGTTAATTTAGTTGAATTTGCTATTGATTCCATTGATACCATTCAACAACAACAGCAATGTCAGGTGGAAGTGCAACAGAAGAAAGGTGGTGATGaacaacaacaacaatatcaacaacaaGGTGAGAGTAAAAGTGGTAAGTTCACTTTGCAACAGCTATTTCAACAATCTAAAGTAATTGATGAAGATATCATCAATAGTAATGGGATGGATTTCGATTTCTCTTGTGATTTTGCTAATTCTAGATTGAGAGAAACTATGATTCTAACTCATAGATTCTCCAAGAACATATTCCGTACAAAAGAGCTGTTTGCATGTAGGACAATTCAGATGCTGATTTCAGGACTAGTTTTGGGGTCAATCTTTTGTAACCTCAAAGATGATCTAAAAGGAACACAAGAAAGGGTTGGTCTATTTGCTTTTATATTAACTTTTCTGTTATCAAGCAGCATAGAAGCTCTACCAATTTTTCTACAAGAGAGGGAGATTCTCATGAAGGAAACATCATGTGGAAGCTACCGTGTTTCGTCTTATGTTATAGCTAATGGATTAGTTTACTTGCCATTTCTTCTAATCCTAGCCATTTTGTTCACAGTGCCATTATACTGGCTTGTTGGTCTTAACAGAAACTTCACTGCTTTTCTCCATTTTCTGTTGCTGATATGGCTTGTTCTTTATACAGCAAATTCAGTTGTGGTGTGTTTCAGTGCTCTTGTGCCTAATTTCATTGTTGGGAATTCAGTGATTGCTGGTGTTATAGGTTCTTTTTTCTTGTTCTCTGGTTACTTCATATCAAACCATGAAATTCCTAGTTATTGGATTTTCATGCATTATATATCACTTTTTAAGTATCCCTTTGAAGGGTTTCTGATCAATGAGTTCTCCAACTCGGGGAAGTGCTTGGAGTACATGTTTGGTGTGTGTGTGATGAAGGGTGAGGATGTGCTTAAAGAAGAAGGGTATGGTGGAGAGAGTAGTAGATGGAAGAATGTTGGTGTCACTGTTTGCTTCATCATCGTTTACAGATTCATTTCTTATGTTATTCTTAGATACAGATGCTCACAGAGGGGTCACCAGTGA 1932 0.3696 MKIQGCEVEAIGINYKIHTNKAEHPFKIFSKSPQQLDTKETEEEEEEEARGEKSCSGVRHVLKNVSCQAKPWEILAIVGPSGAGKSTLLEILAGKHSPQKGSVLLNQKPVDKAQFRKLSGYVAQKDTLFPLLTVEETMMFSARLRLKLPQQQLCSRVKLLVHELGLDHVSGTRIGDDRVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMAETRGRTIILSIHQPGFRIVKLFNSLLLLANGSVLHHGTSDLLSLNLRLMGLELPLHVNLVEFAIDSIDTIQQQQQCQVEVQQKKGGDEQQQQYQQQGESKSGKFTLQQLFQQSKVIDEDIINSNGMDFDFSCDFANSRLRETMILTHRFSKNIFRTKELFACRTIQMLISGLVLGSIFCNLKDDLKGTQERVGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYVIANGLVYLPFLLILAILFTVPLYWLVGLNRNFTAFLHFLLLIWLVLYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISNHEIPSYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGVCVMKGEDVLKEEGYGGESSRWKNVGVTVCFIIVYRFISYVILRYRCSQRGHQ 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00679 643 Pfam ABC-2 type transporter 370 578 IPR013525 GO:0016020|GO:0140359
Car06g00679 643 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 283 IPR003439 GO:0005524
Car06g00679 643 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 635 - -
Car06g00679 643 ProSitePatterns ABC transporters family signature. 182 196 IPR017871 GO:0005524
Car06g00679 643 SMART AAA_5 71 289 IPR003593 -
Car06g00679 643 MobiDBLite consensus disorder prediction 31 52 - -
Car06g00679 643 CDD ABCG_EPDR 52 265 - -
Car06g00679 643 Pfam ABC transporter 62 210 IPR003439 GO:0005524
Car06g00679 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 270 IPR027417 -
Car06g00679 643 Gene3D - 49 343 IPR027417 -
Car06g00679 643 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00679 Car-Chr6 6807034 6809667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00679 61 270 Calmodulin-binding Proteins AT2G36910 27.778 4.12e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00679 K05681 - gmx:100789722 1046.96