Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00675 ATGGATGATGAGAGTCATAATAGTAGTTTACCAAATGGATTCAACAAAGGAAGTCCCGAAAGCCCTTGTTTAAAaacaattaacaacaacaacaataatcatcatgatcatcataatcataatagcaataaagAACAAGACCGTTTTCTCCCTATAGCCAACGTAGGTAGAATAATGAAAAAAGTGATTCCACCAAATGGAAAAATCTCAAAAGAAGCAAAAGAGACAGTTCAAGAATGTGTGTCGGAGTTCATAAGTTTTGTCACGGGAGAAGCATCCGATAAATGCCAAAGAGAAAAAAGAAAAACAATAAATGGTGATGATGTCATATGGGCTATTACAACTTTAGGCTTTGAAGATTATGTTGACCCATTAAAATGTTACCTTCAAAAATATAGAGATATTGAAGGTGAAAAGGTTAATGTTCCAAAACAACAACGTTGTGAACAAAGGCTACTAAATCAACATCAACATCAACATCATCATTACCTTAACCAAGATGAAAATAATCAACATTTCAACAATAGTGTATATACTTCAACAAATCTTATGTCTCAACCTCCTTATGTGACCACTGATCAACCATTTCCATTACCTTTTTCTCCAAATTCAATTCAAAAACAATTACGGCCACAAGACCAAATTGATTCATTAGGACATTGGTATGAATGA 672 0.3095 MDDESHNSSLPNGFNKGSPESPCLKTINNNNNNHHDHHNHNSNKEQDRFLPIANVGRIMKKVIPPNGKISKEAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDVIWAITTLGFEDYVDPLKCYLQKYRDIEGEKVNVPKQQRCEQRLLNQHQHQHHHYLNQDENNQHFNNSVYTSTNLMSQPPYVTTDQPFPLPFSPNSIQKQLRPQDQIDSLGHWYE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00675 223 MobiDBLite consensus disorder prediction 7 30 - -
Car06g00675 223 MobiDBLite consensus disorder prediction 31 45 - -
Car06g00675 223 MobiDBLite consensus disorder prediction 1 47 - -
Car06g00675 223 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Car06g00675 223 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Car06g00675 223 PRINTS CCAAT-binding transcription factor subunit A signature 115 133 - -
Car06g00675 223 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 212 IPR027113 GO:0001228|GO:0006355|GO:0016602
Car06g00675 223 Gene3D Histone, subunit A 35 176 IPR009072 GO:0046982
Car06g00675 223 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-7 1 212 - -
Car06g00675 223 SUPERFAMILY Histone-fold 46 151 IPR009072 GO:0046982
Car06g00675 223 ProSitePatterns NF-YB/HAP3 subunit signature. 80 96 IPR003956 GO:0005634|GO:0006355|GO:0043565
Car06g00675 223 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 49 113 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00675 Car-Chr6 6772233 6772904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00675 44 221 CCAAT-HAP3 Transcription Factor Family AT2G13570 67.935 7.88e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Car06g00675 CBFD_NFYB_HMF 1.2e-26 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00675 K08065 - gmx:100778216 345.51