Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00663 ATGCAAGGTGCTTTAGACTTACCACCTGGCTTCAGATTTCATCCCACTGATGAAGAACTTGTCAATCACTACTTATGTAGAAAATGTTCTTCTCAACCCATCGCTGTTCCCATTATCAAAGAAATCGATTTGTATAAATTTGACCCATGGCACCTACCCGAAATGGCACTTTACGGTGAGAAAGAATGGTATTTTTTTTCTCCAAGGGACCGTAAATATCCAAACGGTTCAAGACCGAACCGGGCTGCGGGAACCGGTTATTGGAAAGCTACTGGAGCCGATAAGCCGATTGGAAAGCCGAAGCCGCTTGGGATAAAGAAAGCACTGGTGTTCTACGCTGGCAAAGCTCCTAAAGGAGTTAAAACCAATTGGATCATGCACGAGTATCGCCTTGCCAACGTTGATAGAACCGCATCCAAAAATAATCACAACTTGAGACTTGATGATTGGGTTTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAACAGCGTCAACAAAGTATCAATGTTTTCTGAGGATGTTCACTTTGAGAATGAGAAGAAGCCTCAGATCAAGATGAACGGCCAGGATGATTTCAGGATTAATGATCACACGGACACGTCGGATTCGGTGCCACGTTTTCACACGGATTCAAGCTGTTCGGAGCACGTGGTTTCGCCGGATGTCACGTGCGAAAAGGAGGTCCAAAGCGAGCCCAAGTGGAACGAATTTGTTTTGGGCCCGGACCCAGTTTCGGCCTTTGATTTTCAGTTGAATTTTATGGACGATGGAGAAGATGACCCTTTTGCCCCTAATGCTCAGTACCAAATGAATCAACTCTCGGGTTGGCAGGATTTGTTAATGTACCTACCCAAGTGA 870 0.4471 MQGALDLPPGFRFHPTDEELVNHYLCRKCSSQPIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKPLGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRTASKNNHNLRLDDWVLCRIYNKKGKIEKYNSVNKVSMFSEDVHFENEKKPQIKMNGQDDFRINDHTDTSDSVPRFHTDSSCSEHVVSPDVTCEKEVQSEPKWNEFVLGPDPVSAFDFQLNFMDDGEDDPFAPNAQYQMNQLSGWQDLLMYLPK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00663 289 Gene3D NAC domain 16 164 IPR036093 GO:0003677|GO:0006355
Car06g00663 289 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Car06g00663 289 PANTHER NAC TRANSCRIPTION FACTOR 56 5 267 - -
Car06g00663 289 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Car06g00663 289 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Car06g00663 289 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00663 Car-Chr6 6670203 6672042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00663 1 289 NAC Transcription Factor Family AT1G01720 62.034 3.46e-123 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g00663 NAM 1.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00663 - - gmx:100170751 468.003