Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00657 atgaatacaccatcatcttcacccattagagcaccaccaccaatgataggCATAAAAAAGAGTTTAGATATTTTAAAAAGCGTTGAGTTGAGAAGAGGCAGAAAGCGTGGAAGCAGAAGAACCTCACTCTTCATCTATTCTCCAATAATGTCTCACATCGCTTTAACTGCATCGCCCACAACCACCGTCCTAGCTTTTCACCGTGGAGCGAAACAATGGAACACGCTGTTTCCATGTAATTGGAGAAGCAGAGGAACATATCCGTCCTTATTTACAAACTTTACCAGAAAACGGTTACAATTGCGGTTTTTTGCTTCGGCCAAAAATGGCGGCAATGGAGGTGGTGTTGTGGATGAGATATCCGAAACTGAAAAGGCGCACACGAATTTCGTGTGGCCTGATAACAAGAAGCCTAGAATTTGTATATTAGGTGGTGGATTTGGTGGTTTATATACTGCTCTAAGGTTGGAATCACTTCAGTGGCCCGATGACAAAAAACCACAGATTGCTCTCGTCGACCAGTCTGAACGATTTGTTTTCAAGCCACTGTTGTACGAGCTTCTATCTGGTGAAGTCGATGAATGGGAAATAGCTCCTCGCTTCTCGGATTTGCTGGCAAACACTGGTGTGCGGTTTTTGAAAGATAGAGTAAAAGTTTTGCAGCCCTCTGATCATTTGGGAGTGAATGGATCCAAATCATCTACTTGTGGAGGAACTGTTCATCTTGAAAGTGGCCTTCATATTGAATATGACTGGCTGGTTCTTGCATTGGGAGCTGAAGCTAAACTGGATCTTGTACCGGGAGCAGCAGAATTTGCAATTCCTTTCTCAACTCTAGAGGATGCACGTAAAGTTAACACTAGATTAGCAATATTAGAGAGAAAGACCTTTGGTAAGGACTACCAAATTAGTGTGGCTATTGTTGGTTGTGGATACTCTGGGGTTGAATTAGCTGCAACATTAGCAGAGCGATTACAAAATAGAGGAATTGTGAGAGCAATTAATGTTGAAACAATGATCTGCCCAACTGCCCCACCTGGCAATAGGGAAGCTGCACTGAAAGTTCTTTCGTCCAGGAAGGTTGAACTTTTATTGGGTTATTTTGTCAACTGTATTCGGAAGGCCAGTGGATTGGAGTCTTCAAATACCCTGACAGGGGTAGATAAGAATTGCATTGAAACAGTGCCCAACTTTGAAAAATATATATTGGAGCTGCAACCTGCTGAAAGGGGAGTGCAGAGTAAAATCGTTGAAGCAGATCTGGTATTGTGGACTGTTGGATCCAAACCTCCTCTTCCTCATCTGGAATATTCCGATGTACCATTTGTAATTCCCCTTAATGCCAGGGGACAGGCAGAAACAGATGAAACTCTTCGCATTAAGGGTCACCCACGGATATTTGCACTTGGTGACTCTTCTGCGTTAAGGGATTCAAATGGAAGGATCCTTCCCGCCACTGCACAGGTTGCATTTCAACAAGCAGACTTTACTGGTTGGAATATCTGGGCTGCAATCAATGGGCGCCCACTTTTGCCATTTAGGTATTGTTGCATTTAG 1557 0.4194 MNTPSSSPIRAPPPMIGIKKSLDILKSVELRRGRKRGSRRTSLFIYSPIMSHIALTASPTTTVLAFHRGAKQWNTLFPCNWRSRGTYPSLFTNFTRKRLQLRFFASAKNGGNGGGVVDEISETEKAHTNFVWPDNKKPRICILGGGFGGLYTALRLESLQWPDDKKPQIALVDQSERFVFKPLLYELLSGEVDEWEIAPRFSDLLANTGVRFLKDRVKVLQPSDHLGVNGSKSSTCGGTVHLESGLHIEYDWLVLALGAEAKLDLVPGAAEFAIPFSTLEDARKVNTRLAILERKTFGKDYQISVAIVGCGYSGVELAATLAERLQNRGIVRAINVETMICPTAPPGNREAALKVLSSRKVELLLGYFVNCIRKASGLESSNTLTGVDKNCIETVPNFEKYILELQPAERGVQSKIVEADLVLWTVGSKPPLPHLEYSDVPFVIPLNARGQAETDETLRIKGHPRIFALGDSSALRDSNGRILPATAQVAFQQADFTGWNIWAAINGRPLLPFRYCCI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00657 518 SUPERFAMILY FAD/NAD(P)-binding domain 299 437 IPR036188 -
Car06g00657 518 Gene3D - 135 516 - -
Car06g00657 518 PANTHER ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE C1, CHLOROPLASTIC/MITOCHONDRIAL 50 515 - -
Car06g00657 518 PANTHER APOPTOSIS-INDUCING FACTOR 1 50 515 - -
Car06g00657 518 PRINTS Pyridine nucleotide disulphide reductase class-I signature 304 329 - -
Car06g00657 518 PRINTS Pyridine nucleotide disulphide reductase class-I signature 139 161 - -
Car06g00657 518 PRINTS Pyridine nucleotide disulphide reductase class-I signature 466 473 - -
Car06g00657 518 Pfam Pyridine nucleotide-disulphide oxidoreductase 139 494 IPR023753 GO:0016491
Car06g00657 518 SUPERFAMILY FAD/NAD(P)-binding domain 136 507 IPR036188 -
Car06g00657 518 PRINTS FAD-dependent pyridine nucleotide reductase signature 250 268 - -
Car06g00657 518 PRINTS FAD-dependent pyridine nucleotide reductase signature 419 435 - -
Car06g00657 518 PRINTS FAD-dependent pyridine nucleotide reductase signature 140 159 - -
Car06g00657 518 PRINTS FAD-dependent pyridine nucleotide reductase signature 304 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00657 Car-Chr6 6628204 6634960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00657 112 495 Chloroplast and Mitochondria Gene Families AT4G21490 22.362 3.55e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00657 K17872 - gmx:100795521 786.949