Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00645 atgatgaaggtgaagaagGGATGTCTAGCTGTTCAAGTTGGATTGGAGGAAGAACAATTCGAAGAGGAAGAGGTTGataataataataataataatTGTTGTCAAAGATTTGAGATCCCGATTTCATATCTTTACCATCCTCTTTTCAAGCGTCTTCTCGACAAAGCTTACGATGTTTATGGCTACAACGCTCATGGTCCCCTCAAGCTACCTTGTTCCGTTGATGATTTTCTTCATCTCCGTTGGCGAATTCACAAAGAATCTACACCCTATCATCACCACCACCATCATCACCATATTCTCCCTCACACTCTGTCTTTCAACTCTTGTTAA 333 0.3784 MMKVKKGCLAVQVGLEEEQFEEEEVDNNNNNNCCQRFEIPISYLYHPLFKRLLDKAYDVYGYNAHGPLKLPCSVDDFLHLRWRIHKESTPYHHHHHHHHILPHTLSFNSC 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00645 110 Pfam Auxin responsive protein 5 83 IPR003676 GO:0009733
Car06g00645 110 PANTHER SMALL AUXIN-UP RNA-RELATED 2 100 - -
Car06g00645 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00645 Car-Chr6 6504427 6505139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00645 4 80 Calmodulin-binding Proteins AT5G20810 41.558 9.31e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00645 K14488 - mtr:MTR_3g097120 142.124