Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00644 ATGTTGCCACCAAATCCTCTAAAAATATTGATGAGGTGGTTCATCATATTCCTTGTTGTGTTGAAACTCAGTTCTGCAACCAAAGATCCTGATGTAGAAGGTGAAGCTCTGCTTGATCTTTTGAATTATCTTAATGATTCAAATAATCAAATAACAGATTGGGATAGTCATTTAGTGAGCCCTTGTTACAGTTGGTCACATGTCACATGTAAAAATGGACATGTCATATCACTGACCCTGGCTTCAATTGGATTTTCTGGAACACTTTCTCCCTCAATTGCCAGATTGAAATATTTGGTTAACTTGGAATTGCAGAACAACAATCTTTCAGGCCCTTTACCTGATTACATTGCCAACTTGACATACCTACAATATCTAAATCTTGCTGACAACAATTTTAATGGTTCTATACCACCTAGTTGGGGTCAAATATCCAGTCTCAAGAATGTGGATCTTTCATCTAATGGTCTTACTGGAACTATTCCAACACAACTATTTTCAGTTCCAACGTTTAACTTTTCAGATACTCACCTTGGTTGTGGCTCTAGCTTGGAGCAGCCTTGTGTTTCTAAATCTGATCATCCAGATTCAACCAAGAAATCAAAACTTGCAAAGGCGGTACGTTTCGCGAGTTGTGGTGCATTTGCAATTCTGTTTCTTGGAGCCATCTTTACATATAGACACCATCAAAAGCACAGACACAAAAGTGAAGTCTTTGTTGATGTTTTAGGAGAAGATGAGAGCAAAATATCTTTTGGACAGTTAAGAAGGTTTTCTTTGCGCGAAGTCCAAATTGCAACTAAAAATTTCAGTGAAAGCAATGTAATCGGTCAGGGTGGTTTTGGAAAAGTGTACAAAGGAGCACTCTCGGATAACACGAAAGTCGCTGTGAAACGCCTGACTGATTATCATAATCCTGGTGGAGAGGCTGCATTTGAGAGAGAAGTTCATCTCATTAGTGTTGCAGTTCATAGAAACCTCCTAAGACTAATTGGATTCTGTACAACCTCAACTGAAAGAATCCTTGTATATCCTTTCATGGAAAATCTAAGCGTAGCATATCGATTAAGAGATTTGAAATCTGATGAAAAAAGCTTGGATTGGGCGACAAGGAAGCGTGTGGCTTTTGGTACAGCACATGGTTTGGAATATCTACATGAGCAATGCAATCCGAAGATAATTCACCGCGATCTAAAGGCTGCAAATATCCTTCTAGATAATGAGTTTGAACCTGTTCTAGGTGATTTTGGGCTAGCCAAGCTGGTTGATGCTAGGATGACTCATGTTACCACTCAAGTCCGCGGTACAATGGGACATATTGCTCCAGAGTATTTGTCCACTGGAAAATCTTCTGAGAAGACAGATGTTTTTGGATATGGCATTACACTTCTTGAACTAATCACCGGTCAACGTGCCATTGATCTCTCTCGTCTCGAAGAGGAGGAGGATGTTCTTCTCATTGATCATGTAAAAAATCTACTAAGAGACAATAGGCTAGAGGACATAGTGGATAACAATTTGGAGACATATGATCCCAAAGAAGCTGAGACAATTCTTCAAGTTGCATTACTTTGCACACAAGGGTATCCGGAGGATCGACCGACCATGTCCGAGGTTGTAAAAATGTTGCAGGGAGTAGGGTTGGCAGATAGATGGGCTGATTGGAAACAACTTGAAGAAGCTAGAAATAAAGAAATTGAATTATCACTCATGACTCATCAATTTCCTTGGAGTGATGAATCTACTCTTGATCAAGAAGCTATACAACTTTCAAGAGCAAGATAG 1785 0.395 MLPPNPLKILMRWFIIFLVVLKLSSATKDPDVEGEALLDLLNYLNDSNNQITDWDSHLVSPCYSWSHVTCKNGHVISLTLASIGFSGTLSPSIARLKYLVNLELQNNNLSGPLPDYIANLTYLQYLNLADNNFNGSIPPSWGQISSLKNVDLSSNGLTGTIPTQLFSVPTFNFSDTHLGCGSSLEQPCVSKSDHPDSTKKSKLAKAVRFASCGAFAILFLGAIFTYRHHQKHRHKSEVFVDVLGEDESKISFGQLRRFSLREVQIATKNFSESNVIGQGGFGKVYKGALSDNTKVAVKRLTDYHNPGGEAAFEREVHLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKSDEKSLDWATRKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDNEFEPVLGDFGLAKLVDARMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELITGQRAIDLSRLEEEEDVLLIDHVKNLLRDNRLEDIVDNNLETYDPKEAETILQVALLCTQGYPEDRPTMSEVVKMLQGVGLADRWADWKQLEEARNKEIELSLMTHQFPWSDESTLDQEAIQLSRAR 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00644 594 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Car06g00644 594 Gene3D Phosphorylase Kinase; domain 1 239 346 - -
Car06g00644 594 ProSiteProfiles Protein kinase domain profile. 270 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00644 594 Coils Coil 583 594 - -
Car06g00644 594 SUPERFAMILY L domain-like 34 169 - -
Car06g00644 594 Pfam Protein kinase domain 271 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00644 594 SMART serkin_6 270 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00644 594 Gene3D Ribonuclease Inhibitor 30 193 IPR032675 -
Car06g00644 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 393 405 IPR008271 GO:0004672|GO:0006468
Car06g00644 594 PANTHER LRR RECEPTOR-LIKE KINASE 8 594 - -
Car06g00644 594 Gene3D Transferase(Phosphotransferase) domain 1 347 562 - -
Car06g00644 594 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Car06g00644 594 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 594 - -
Car06g00644 594 SUPERFAMILY Protein kinase-like (PK-like) 249 544 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00644 Car-Chr6 6490685 6496405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00644 8 594 Receptor kinase-like Gene Family AT5G10290 54.221 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Car06g00644 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00644 - - gmx:100800886 1005.74