Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00636 ATGCCTCTTTTAAAGAGGAAGCCTTTTGCCTTGACTGAGCCTCCTCAGGATTTGAAGCCAGACGAGCATGTTTACCAAGTTCGATTTACAAAAGAAATATTTCGAGATTATCATGATTATTTGAACCGTTTGAATCTATACCGCCAGAGGGTTTGGGCATGTAAGGTAACTGGAAAAACTGGCTTGACTTATGAAGAGGCTTTGGTGTCAGAACAACAAGCCACTGAGAAATTCCTACAGTTTCCTAAAGAATTTATGGCACCTGCTTTAAGGATCATTCAATACAGTATGCTACCTTTGAAGGATCTTGCCGATTCTATTGCTGAAAAATTGCAGGAACGTTTGTTTGTCGGTGCTGAGTTGTATGGGAAAAAAGATGACGATGTATGTCCATGCAAAATATTAAAAGTCATCCAGGAAGAAGTTGACAAATACCGTTATGAGATAGCTTGGCTTGACAAAAGCAAGAATGTAATTGAAAAAGCAGAAGTCAGTGCAGAAGACTTGGTGCAAAAGAAGCCGCTTTTTAGTAGAAATATTTTGAAGTCTTTTATCCGGGAATCTACATATCGAAATGCCCCTTGGGTTTTACACGACAAACTTGCACAAAATCACGGTATCTCAACTGATATTCCTGAGGAGTTACGAGGAAAGCTTTTTATCAAAGATGGACTTATAATTTGCTCCAAGAAAAGGAAAACTGAGGAATCAATGGAAGAAGCTGATAAACCTAAAAGGAAGAAGTTGGATGGGACATTAGTCAACGGTTCTGCACAAGAGAACGATAATGGAGAATCCAAGGAAAAACCAGTCAAATATCCCATTGATGATCTATTGGTGAAGCCTAGTCCAGATGACCCTGTTTTCACTGATCGTCCTTCTCCATCGAGAGACTTCAATGTTCCAATGTATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAAACAGTTACACTTGTGGCCCTACTCTTTGGAAGATTTTGAAAATGCAATCTGCCATAAGGATGGCAATGTGGTTCTCCTTGTGGAATGTCATGCTGCACTTTTCCGGGTTCTTATAGAAGATGATGGTGAATTCACTTCAGCTGTACAGAAACGAAAGTTGAAGAAGATTACAATGGTGAACTGGAGAGAATATTTATGCGACTTTCTAGAAATGATCAATATTCCTCGATTACGGAACTTTGAAGCAACCATTAAACGGGGACATTATGGCCTTGTAGACGTCAATGCAAAATTAGAAATCTTATGTGAGTTGGTCAATCAAGCCCTTGAAACCGCAGTTTTCAGGGATAAGATGGATAAGATTCTTGAACAGCGGCACGAACTTGGGGCCTCTAAAAGGGAAGAAGCTCTGGAAGATGGTAGGAAGAGAAGAGAAAAAAAGGAGAGGTTGAAAGCTGACTCAGAAAGCAATGGGCATCATCTAAACAGTGGAAACAGCTTAACAAACAATAATCACATTATGCAAAATGGGCACGAGGGAAAGAAAATTAATGGAGAGATAGAATCACCTAGGCTAGACAATTCACATGGTAGAAGTGGGATCAAGCATTCAAGTCCTGCTTCAAAAAAGACGCCTAAAAACCTGGATTCAGAGCAGAAAGAACCCACAGAAAATGAAAAAGAATCATCCAGAAAGGGACTACTGAAGCAGTTGAAGGCAGATAAGGATCCATCAGATAAGAATAGTATACAGAAGAGGAGAGAATATTTTGAACGGGAGATGGAGAAACGACCTATTCAAAGAAGCCCATTAGGTAAAGACAGAGATTACAATAGGTATTGGTGGTTCCGTCGTGATGGAAGGATATTTGTTGAAAGCTGCGACTCCAAGGAGTGGGGATACTACAGCAGCAAGGAAGAGCTTGATGCATTGATGGGTTCACTGAATTGCAAGGGTGAGCGTGAAAGGGCACTGCAAAGACAACTGGGAAAACATTATATTAGCATAAGCTCAGAACTCCAGAAAAGATCTAAGGATTTGATGCAAAATATGGCAAATGATGATGAGTCTGTGCTTCGAAGGTCTACTCGTGTTCGAGCTCCACCCAGGCAAAACCCTGCCAACGCCTTCCTCAATTATGTTAACAAGTGGAAACAAGAGTAG 2127 0.4043 MPLLKRKPFALTEPPQDLKPDEHVYQVRFTKEIFRDYHDYLNRLNLYRQRVWACKVTGKTGLTYEEALVSEQQATEKFLQFPKEFMAPALRIIQYSMLPLKDLADSIAEKLQERLFVGAELYGKKDDDVCPCKILKVIQEEVDKYRYEIAWLDKSKNVIEKAEVSAEDLVQKKPLFSRNILKSFIRESTYRNAPWVLHDKLAQNHGISTDIPEELRGKLFIKDGLIICSKKRKTEESMEEADKPKRKKLDGTLVNGSAQENDNGESKEKPVKYPIDDLLVKPSPDDPVFTDRPSPSRDFNVPMYCVGDLLMVWDFCTSFGKQLHLWPYSLEDFENAICHKDGNVVLLVECHAALFRVLIEDDGEFTSAVQKRKLKKITMVNWREYLCDFLEMINIPRLRNFEATIKRGHYGLVDVNAKLEILCELVNQALETAVFRDKMDKILEQRHELGASKREEALEDGRKRREKKERLKADSESNGHHLNSGNSLTNNNHIMQNGHEGKKINGEIESPRLDNSHGRSGIKHSSPASKKTPKNLDSEQKEPTENEKESSRKGLLKQLKADKDPSDKNSIQKRREYFEREMEKRPIQRSPLGKDRDYNRYWWFRRDGRIFVESCDSKEWGYYSSKEELDALMGSLNCKGERERALQRQLGKHYISISSELQKRSKDLMQNMANDDESVLRRSTRVRAPPRQNPANAFLNYVNKWKQE 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00636 708 SMART testlast3 303 364 IPR018501 -
Car06g00636 708 MobiDBLite consensus disorder prediction 534 572 - -
Car06g00636 708 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 706 - -
Car06g00636 708 Pfam DDT domain 305 361 IPR018501 -
Car06g00636 708 ProSiteProfiles DDT domain profile. 303 364 IPR018501 -
Car06g00636 708 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 404 440 IPR028942 -
Car06g00636 708 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Car06g00636 708 MobiDBLite consensus disorder prediction 236 270 - -
Car06g00636 708 Coils Coil 152 172 - -
Car06g00636 708 MobiDBLite consensus disorder prediction 454 572 - -
Car06g00636 708 MobiDBLite consensus disorder prediction 236 250 - -
Car06g00636 708 MobiDBLite consensus disorder prediction 500 519 - -
Car06g00636 708 MobiDBLite consensus disorder prediction 454 477 - -
Car06g00636 708 MobiDBLite consensus disorder prediction 478 498 - -
Car06g00636 708 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 588 653 IPR028941 -
Car06g00636 708 ProSiteProfiles WAC domain profile. 22 127 IPR013136 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00636 305 361 Homeobox Transcription Factor Family AT1G28420 45.614 8.99e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Car06g00636 WAC_Acf1_DNA_bd 1.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00636 - - gmx:100789956 1010.36