Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00628 ATGGAGAGAAAACCACTTGGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTCTTCCTTCTCTCAGCAGGTGTTATGGTTAAGATAGCAGAGGGTCGAATTGGTGTTAATTTACAACAGAGAGGAATATGCTTCTACCCGAGTGAGAAGTTCACGGGTGTTTGCATGCTTGACGAGTTATGTGAATCTATATGCATAACGGAAGATTTCCTCTATGGCAACTGTGGAGGCCTTCAGTGGACATGCCATTGCATTGGTTATTGTTGA 276 0.3877 MERKPLGVXXXXXXXXXXXXLFLLSAGVMVKIAEGRIGVNLQQRGICFYPSEKFTGVCMLDELCESICITEDFLYGNCGGLQWTCHCIGYC 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00628 91 Pfam Gamma-thionin family 46 91 - -
Car06g00628 91 ProSitePatterns Gamma-thionins family signature. 45 68 IPR008176 GO:0006952
Car06g00628 91 Gene3D - 45 91 IPR036574 -
Car06g00628 91 SUPERFAMILY Scorpion toxin-like 46 91 IPR036574 -
Car06g00628 91 SMART gth_4 46 91 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00628 Car-Chr6 6314656 6317046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00628 28 91 Plant Defensins Gene Families AT2G02120 35.938 1.13e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00628 - K20191 tpal:117646042 33.8834