Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00627 ATGGAGAAGAAAACACTCGGAGTCTTGTTCATGTTTTTTCTTCTATTAACCGCTGATGTTGCAGTTAAGACAGCAGAGGCTCGAACGTGCGAGTCAAGGAGCCACAGGTTTAAGGGTACATGCTTGAGTGACACCACCTGTGCACATGCATGCAGGAATGAAGGTTTCAGTGGTGGCGACTGCCGAGGCCTCCGCCGTCGCTGCTTCTATGTTACAGTTAGGACAACAGAGAGTCCACCATGCGAGTTAAAGAGCAAGAATTTCAAAGGTGTTTGCTGGATTTACAGCGTCTGTACAGCAGTATGCACGATGGAAGGTTTCCTTGAAAAACTGAAAAAAGAGGAAAGGGTAAACAATGATCAAAACATATAA 372 0.4543 MEKKTLGVLFMFFLLLTADVAVKTAEARTCESRSHRFKGTCLSDTTCAHACRNEGFSGGDCRGLRRRCFYVTVRTTESPPCELKSKNFKGVCWIYSVCTAVCTMEGFLEKLKKEERVNNDQNI 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00627 123 Gene3D - 80 110 IPR036574 -
Car06g00627 123 PANTHER DEFENSIN MTDEF4.7 71 108 - -
Car06g00627 123 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Car06g00627 123 SUPERFAMILY Scorpion toxin-like 81 108 IPR036574 -
Car06g00627 123 CDD Knot1 39 69 IPR003614 GO:0006952
Car06g00627 123 Gene3D - 28 73 IPR036574 -
Car06g00627 123 SMART gth_4 29 74 IPR003614 GO:0006952
Car06g00627 123 PANTHER DEFENSIN MTDEF4.7 1 70 - -
Car06g00627 123 PRINTS Purothionin signature 45 58 IPR008176 GO:0006952
Car06g00627 123 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Car06g00627 123 Pfam Gamma-thionin family 81 107 - -
Car06g00627 123 Pfam Gamma-thionin family 28 69 - -
Car06g00627 123 PANTHER DEFENSIN-LIKE PROTEIN 1 71 108 - -
Car06g00627 123 SUPERFAMILY Scorpion toxin-like 28 69 IPR036574 -
Car06g00627 123 PANTHER DEFENSIN-LIKE PROTEIN 1 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00627 Car-Chr6 6306142 6309655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00627 8 69 Plant Defensins Gene Families AT2G02100 61.290 9.20e-24 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00627 - - qsu:112007065 94.7449