Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g00626 | ATGGAGAGGAAAACACTCAGGGTTTTGTTCATGCTCTTCCTCCTCTTAGCCACTGATGTAGATGTTGCGGTTAAGACAGCAGAAGGTAAATTGTGCCCGTTCCCGAGCAAGAAGTTCAAGGGTGACTGCTTAAACGACAAACCCTGTGTAAATACTTGCACGACCGAAGGTTTCAGCACGGGCTCTTGTAACCCCAAATGCCTCTGCGATTGCTTTTTGTATTGTTGA | 228 | 0.4649 | MERKTLRVLFMLFLLLATDVDVAVKTAEGKLCPFPSKKFKGDCLNDKPCVNTCTTEGFSTGSCNPKCLCDCFLYC | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g00626 | 75 | ProSitePatterns | Gamma-thionins family signature. | 30 | 53 | IPR008176 | GO:0006952 | |
| Car06g00626 | 75 | Pfam | Gamma-thionin family | 31 | 75 | - | - | |
| Car06g00626 | 75 | Gene3D | - | 30 | 75 | IPR036574 | - | |
| Car06g00626 | 75 | PANTHER | DEFENSIN-LIKE PROTEIN 1 | 1 | 72 | - | - | |
| Car06g00626 | 75 | SUPERFAMILY | Scorpion toxin-like | 35 | 71 | IPR036574 | - | |
| Car06g00626 | 75 | PANTHER | DEFENSIN MTDEF4.7 | 1 | 72 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car06g00626 | Car-Chr6 | 6300034 | 6302395 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Car06g00626 | 5 | 70 | Plant Defensins Gene Families | AT2G02140 | 34.328 | 7.76e-10 | 48.1 |