Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00591 ATGGCAACATCAGAGGTAACTATGAAAGGAAATTGTGTAAACGGAAAAGGAGAAACCAACGACGCTGTAGGAGATGGTCAACAAAATGGTTCTTCATCTACATCATCAGGGAGAGAAGCAGAAGCAGCACTTTACAGAGAACTATGGCATGCTTGTGCTGGTCCCCTGGTCACAGTTCCAAGAGAAGGAGAGCTTGTGTTCTATTTTCCTCAGGGACATATTGAACAGGTGGAGGCGTCGACCAATCAGGTGGCGGAACAACACATGCCTGTTTACGATCTCCGACCTAAGATCCTTTGTCGGGTTATCAACGTTATGTTGAAGGCGGAGCCAGATACTGATGAGGTGTTTGCACAAGTGACTTTGGTACCAGAGCCAAATCAAGATGAGAATGCTGTGGAGAAAGAACCACCCCCTGCTCCTCCGCCCAGATTTCACGTTCATTCGTTTTGCAAAACCTTGACTGCGTCTGATACTAGTACTCACGGTGGATTTTCTGTCCTTAGAAGACACGCTGATGAATGTCTTCCTCCACTGGACATGTCAAAGCAACCTCCAACGCAGGAATTGGTTGCCAAGGATCTACATGGGAATGATTGGCGTTTTAGGCACATCTTTCGTGgtcaaccacggagacatttgctacagagtggttggagtgtttttgtcagctctaagaggctggttgctggggatgcatttatattcctcagaggtgagaatggggagctccgagttggtgtccggcgtgccatgagacagcagggtaatgttccgtcctcggttatctctagtcatAGTATGCATCTTGGAGTCCTTGCAACTGCCTGGCATGCCGTGTTGACTGGTACCATGTTCACTGTCTATTATAAGCCTCGAACTAGTCCTGCGGAATTTATTGTTCCATATGATCAATACATGGAATCTCTCAAAAACAATTATACCATAGGCATGCGGTTCAAAATGAGGTTTGAGGGTGAAGAGGCTCCTGAGCAAAGGTTTACGGGTACCATTGTTGGAATTGAAGACTCTGACTCTAAAAGATGGCCTAAATCTAAATGGCGATGTCTCAAGGTTAGATGGGATGAAACATCTAACATACCTCGTCCTGAGAGAGTTTCCCCTTGGAAAATCGAGCCTGCTCTTGCTCCTCCAGCTCTAAATCCTCTTCCAATGCCCCGGCCTAAAAGGCCTCGTTCTAACGTGGTCCCATCATCCCCGGATTCTTCTGTTCTTACTCGTGAAGCATCGTCTAAAGTAAGCATGGACCCGTTGCCCGCAAGTGGGTTTCCGAGGGTCTTGCAAGGTCAAGAATCATCGACCTTGAGAGGTAATTTGGCAGATAGCCACGAGTCTTATGCCGAGAAGTCTGTCGTGTGGCCACCCGCAGCAGATGATGAAAAGATTGATGCTGTTTCTACTTCAAGAAGGTACGGATCAGAGAACTGGATGTCAGTGTCAAGGCAGGAACCAACATATTCGGATCTTCTGTCAGGATTCGGGGCTGTCCGTGGAGATAATTCTTCCCAACCATTATTCGTCGACCAATCCGGTCATGTGGCCAACCTTGGTAGAAAAAGTATGTTGGATCGGGACGGAAAACATAATGTGTTTAGTCAATGGCCTGTTATGCCACCTGGTCTGTCACTCAATTTCTTGCACTCTAATACAAAAGGTTCCCCACAAGGCATTCCAGGGAATATGAGATACAGTGCATTTGGTGATTATTCTGTGCTTCAAGGACATAAAGTTGAAAGTCCTCATGGAAATTTTTTGATGCCACCACCACCTCCTACTCAATACGATAGTCCTCATTTAAGAGAACTATCACACGATAGTCCTCATTTAAGAGAACTATCACAGAAACAAATATCTGCAAAAACAGGCGAGGTTGCAAAACCAAAAGACAGTGTGTGTAAGCTATTTGGCTTCTCACTTCTCAGTAGCCTGAACACGCCAGATCCTTCTATACCGCAAAGAAATGTTACAAGCGAGTCAGTTAGTCACATGCATCTTGCATCACAACAACATCAAACATTTGAAAATGATCAAAAGTGTGAGCATTCGAAGAGCTCAAAACCAGCAGATAATGTAGTTGTGGTCGATGACCAAGGGAAGCTGTTGCAAACTTCTCAGCCTCAGGTTAAAGATGTTCAACTCAAACCTTATAATGCTTCCGCTAGAAGTTGCACCAAAGTTCACAAGAAAGGGATTGCGCTCGGTCGATCAGTGGACCttacaaagttcactgactatgatgaattaattgctgaattggatcaactgtttgaatttggtggtgaattgaTATCTCCACAAAAGGAATGGCTTGTTGTCTACACTGATAATGAGGATGACATGATGCTTGTTGGTGATGATCCATGGCAGTAA 2391 0.4049 MATSEVTMKGNCVNGKGETNDAVGDGQQNGSSSTSSGREAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQVAEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEPPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPKSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRSNVVPSSPDSSVLTREASSKVSMDPLPASGFPRVLQGQESSTLRGNLADSHESYAEKSVVWPPAADDEKIDAVSTSRRYGSENWMSVSRQEPTYSDLLSGFGAVRGDNSSQPLFVDQSGHVANLGRKSMLDRDGKHNVFSQWPVMPPGLSLNFLHSNTKGSPQGIPGNMRYSAFGDYSVLQGHKVESPHGNFLMPPPPPTQYDSPHLRELSHDSPHLRELSQKQISAKTGEVAKPKDSVCKLFGFSLLSSLNTPDPSIPQRNVTSESVSHMHLASQQHQTFENDQKCEHSKSSKPADNVVVVDDQGKLLQTSQPQVKDVQLKPYNASARSCTKVHKKGIALGRSVDLTKFTDYDELIAELDQLFEFGGELISPQKEWLVVYTDNEDDMMLVGDDPWQ 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00591 796 Gene3D - 147 252 IPR015300 -
Car06g00591 796 ProSiteProfiles B3 DNA-binding domain profile. 150 252 IPR003340 GO:0003677
Car06g00591 796 SUPERFAMILY CAD & PB1 domains 726 796 - -
Car06g00591 796 SUPERFAMILY DNA-binding pseudobarrel domain 146 279 IPR015300 -
Car06g00591 796 MobiDBLite consensus disorder prediction 1 38 - -
Car06g00591 796 PANTHER AUXIN RESPONSE FACTOR 2 29 796 - -
Car06g00591 796 MobiDBLite consensus disorder prediction 21 38 - -
Car06g00591 796 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 29 796 IPR044835 GO:0003677|GO:0006355|GO:0009725
Car06g00591 796 MobiDBLite consensus disorder prediction 402 417 - -
Car06g00591 796 Pfam B3 DNA binding domain 150 251 IPR003340 GO:0003677
Car06g00591 796 MobiDBLite consensus disorder prediction 384 400 - -
Car06g00591 796 MobiDBLite consensus disorder prediction 384 432 - -
Car06g00591 796 ProSiteProfiles PB1 domain profile. 728 796 IPR000270 GO:0005515
Car06g00591 796 Gene3D - 724 796 - -
Car06g00591 796 Pfam Auxin response factor 276 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Car06g00591 796 Pfam AUX/IAA family 711 796 IPR033389 -
Car06g00591 796 Gene3D - 313 383 - -
Car06g00591 796 CDD B3_DNA 148 250 IPR003340 GO:0003677
Car06g00591 796 SMART B3_2 150 252 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00591 Car-Chr6 5971202 5974894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00591 1 796 B3 DNA Binding Superfamily AT5G62000 64.146 0.0 1018
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Car06g00591 AUX_IAA 7.2e-05 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00591 - - gmx:100780892 1229.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00591 06 5971202 5974894 Car06g00591 06 5971202 5974894 ECH