Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00588 ATGGCAACACAGTCTGAACGCCTTGGATATGAATTTGCTAAGTGGCTCGGAATCCAAACTCCTCAGGCTAGAGTCGTTCACAATACCAGTTCAGAATGGCAACAAATAAAGGAAGCTACAGAAAAAGCTAGAGAAGCGGCGGCAAATTCTGAGAATGATGAAATTGGTGAAGTGACATGTTTTGAACTTTTGGAAGCTCTCGAGCTAAGCCGATGTTTGTTTTTAATGAGTTATGTGCATGGTTCGCCTTTGCTTGAAAATTCTAGTGTCTTTGAATCAAAGGAATCTGCAGAAAAAACATCAGAAGCTCTTGGCAGGGTACTGTTGCTGGACTTAGTCATCCGAAATGAAGATAGGCTCCCTTGCCGTGAGCTTAGGTGGCGTGGGAATGCTGCAAATTTATTGTTGGCTGAAAAGATGATCTCTGCAAATACAAATACACTAGAAGCAGCTTTGGATTCTGCAATTAATCTATATAGACCGAATGTGATTAGGGCACTTCAAAAAGAAAGAAGGTCAAGTTCAGTAGATAGCAGATTGAATTCCCAAAATCATGGCTTGATATCACAAGACTCCGATCTTTCAGAGGTCACAGAATCACCAAGATCCGTTGATATGAACCTTAAAAGTCAAACATCAGAAGAATTAATGTCTTCTGACCTTAACATTGTAGTCATTGATTCTGGTGTTCCTCGGCGACCCCCTGCCGGAAAACGTGCAAACGATCAGGTTAATTATCCTAAGTTGATTGAGTTGCTAATCAATAGTTCTGAGTATGCATCAAACCTGTTAAATGATATAACTGGAGGGAAATTAGGATGTCCTCTACCAGAAGACATGGATACAACTGATATACATGCAAGTGACATGATATCGGTAGTTCATGCATTTCGTAATGGTTTCCGAGCTGCTCTTAGGGACCTACAAGGATTCCATATATTCCTATTCACCCTTCACCAAAGGCTTGATACTTTGCTACGATCATTTATGAACATTATAAGCAAAATATCTTCCGCAGAATCTGACAGAGAGGACTCATCGGTTCCTGACTCACCTTCACTGGCTGCTACTGGTTGTTGTTCCTCTCCAACAAGTAAAGAGAGGCATGTTAATGATAACAATCAAGATTTTACTGATTCAGAACCACATAGAACTACTTCAAGGCAATTGTCTTCAAGTAATAGAGATTGTAGTGACTCGACTTCTGTGACAAGAGAAAGTTGGCATGGAAAGTTTTGTAAAGGAAATGGGGAGACACTTCGTAATCTCCGTTTGACAGCTAAGCTCCGTGACTTTAATAAATTTGCCAAGGTTGATGCTGAATGTCATAAAGAATTGGAACAATGGAATGAAATGCTTAAAAATGATGCCGTCAAGTTATGCCAGGAGAACAATTTCAATTCAGGATTTTTTGAGGGTAGTGACAATAACAGCGTCGTTGATGCATATGAACTGAAGGTCAGACTTGAGCATATACTTGAGAGAATTGCATTGATATCTGATGCTGCAAGTACAGAGAGACCGTCTGCCGTTACAAGCTGTTTGTTCATTGGTGGGGCATTGGTTGCAAGATCTGTATACACTCTGCAATACTTGGGAATCAAACATATTTTGTGTTTGTGTACAAATGAAATTGGACAATCTGAAACTCAATATCCTGATCTATTTGAATACAAAAATTTCTCCGTCTGCGACAGTGAAGATTTTAACATCACCACTGTATTTGAAGAAGCGTGTGATTTCATAGATTATGTTGAACAAAAAGGTCAGAAAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGTGCTACATTGGTCCTTGCCTACCTAATGCTCAGAAAGAAGTATACTTTATCAAAAGCTTGGCAAACTCTGAAACGAGTTCACCGTCGAGCACATCCAAATGATGGTTTTGCAAAGATTTTACAGGAACTGGATCAGAAACTACATGGGAAGGTTTCAATGGAGTGGCAGCAGCGGAAACCGACCATGAAAGTCTGTCTGATATGCGGGAAAAATGCTGGACTGAGCAGTAGCTCACTTAAACTACACCTGCAGAAATCACATAGAAAGTTATCATCTGGTAGTGTGGATAGTGCCATGACAATGGAAATCCAAAAAGCATTAACAGCTTTGAAGATTAGCCGTGGTGGCAGTGTTAGTCCCACACAAAGGTCGTCTCATTCAATAATGGATCAATAG 2205 0.4005 MATQSERLGYEFAKWLGIQTPQARVVHNTSSEWQQIKEATEKAREAAANSENDEIGEVTCFELLEALELSRCLFLMSYVHGSPLLENSSVFESKESAEKTSEALGRVLLLDLVIRNEDRLPCRELRWRGNAANLLLAEKMISANTNTLEAALDSAINLYRPNVIRALQKERRSSSVDSRLNSQNHGLISQDSDLSEVTESPRSVDMNLKSQTSEELMSSDLNIVVIDSGVPRRPPAGKRANDQVNYPKLIELLINSSEYASNLLNDITGGKLGCPLPEDMDTTDIHASDMISVVHAFRNGFRAALRDLQGFHIFLFTLHQRLDTLLRSFMNIISKISSAESDREDSSVPDSPSLAATGCCSSPTSKERHVNDNNQDFTDSEPHRTTSRQLSSSNRDCSDSTSVTRESWHGKFCKGNGETLRNLRLTAKLRDFNKFAKVDAECHKELEQWNEMLKNDAVKLCQENNFNSGFFEGSDNNSVVDAYELKVRLEHILERIALISDAASTERPSAVTSCLFIGGALVARSVYTLQYLGIKHILCLCTNEIGQSETQYPDLFEYKNFSVCDSEDFNITTVFEEACDFIDYVEQKGQKILVHCFEGKSRSATLVLAYLMLRKKYTLSKAWQTLKRVHRRAHPNDGFAKILQELDQKLHGKVSMEWQQRKPTMKVCLICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRSSHSIMDQ 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00588 734 MobiDBLite consensus disorder prediction 348 368 - -
Car06g00588 734 SMART dsp_5 507 649 IPR020422 GO:0006470|GO:0008138
Car06g00588 734 Gene3D - 83 218 IPR036940 GO:0016301
Car06g00588 734 MobiDBLite consensus disorder prediction 384 402 - -
Car06g00588 734 MobiDBLite consensus disorder prediction 177 202 - -
Car06g00588 734 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 1 734 - -
Car06g00588 734 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 576 628 IPR000387 GO:0016311|GO:0016791
Car06g00588 734 CDD DSP 508 645 - -
Car06g00588 734 SUPERFAMILY Protein kinase-like (PK-like) 1 243 IPR011009 -
Car06g00588 734 MobiDBLite consensus disorder prediction 340 402 - -
Car06g00588 734 Gene3D Protein tyrosine phosphatase superfamily 490 662 IPR029021 -
Car06g00588 734 SMART ptp_7 557 669 IPR003595 -
Car06g00588 734 Pfam Dual specificity phosphatase, catalytic domain 526 648 IPR000340 GO:0008138|GO:0016311
Car06g00588 734 ProSitePatterns Tyrosine specific protein phosphatases active site. 594 604 IPR016130 GO:0016311|GO:0016791
Car06g00588 734 MobiDBLite consensus disorder prediction 174 202 - -
Car06g00588 734 ProSiteProfiles Dual specificity protein phosphatase domain profile. 507 652 IPR020422 GO:0006470|GO:0008138
Car06g00588 734 MobiDBLite consensus disorder prediction 369 383 - -
Car06g00588 734 Pfam Actin-fragmin kinase, catalytic 3 229 IPR015275 -
Car06g00588 734 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 734 IPR035010 GO:0004721|GO:0009737|GO:0043622
Car06g00588 734 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 507 652 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00588 Car-Chr6 5944014 5951074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00588 1 718 Protein tyrosine phosphatase (PTP) family AT5G23720 64.601 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00588 K14165 - gmx:100799468 1178.7