Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00580 ATGAATGATGACCGTGAATATGAAAACGGTAGGCATAAGATGGAATACTACAGAGGAGCACATTCCCTGTGGAATACGGACCCCCAGCATCAAGTAAAGGAACAAAATGCCCTAGTTATGAATAAAAAAATTAGGTCCATTATGGCTGAAAGGCAGGCTGCCATTCTGGAACTTGAACTAGAGGCTGCTATATCAGAAAAGAACGAAGCCTTGGCTGCTCGAGATGCAGCCCTTCGGCAGAGGGATGAAGCACTTGCTCAGAGGGATAGTGCTCTATTGGAACGGGATAATGCCCTTGCAGCCCTTCAAAGTCGGAGTAATTCCGTCAACTTTCCATTCAATGGTGGGTCGAAGCGGATGCACCATTCTTCCAACCATCTATCCGACATGACAGAAGCAGCATATGGCTCAAAGGATATAATAATAAGAGACGCCTCTCCGGTTACTGTTATAACTTCTGAAGCTGTCAAATCTCATCTAGCTAAGAGGTCAAAGGGGAACAAGGTATCAAAACCACCTACCAAAGTAAAGAAAATGGGTGAGGATTTAAATAGGAAGGCTTATTCTGAAGGTACAAAGATCAAATCTGAATGGGATAGGCAGGATGTCGGGTTGAATTTGGTTGCTTTCGATGAAACTATCATGCCTGTCCCAGTTTGCACGTGCACCGGAGTACCACGACAGTGCTACAAATGGGGGAATGGTGGATGGCAATCATCTTGTTGTACTACTACATTGTCGATGTATCCACTACCACAGCTTCCAAACAAGCGGCACGCTCGCATTGGAGGGCGGAAAATGAGCGGCAGTGTTTTTACTAGACTTCTCAGTAGGTTGGCATCAGAAGGCCATGATGTATCTATACCATTGGATCTTAAAGAATACTGGGCCAGACATGGAACAAATCGCTACATTACAATCAAGTAG 927 0.4488 MNDDREYENGRHKMEYYRGAHSLWNTDPQHQVKEQNALVMNKKIRSIMAERQAAILELELEAAISEKNEALAARDAALRQRDEALAQRDSALLERDNALAALQSRSNSVNFPFNGGSKRMHHSSNHLSDMTEAAYGSKDIIIRDASPVTVITSEAVKSHLAKRSKGNKVSKPPTKVKKMGEDLNRKAYSEGTKIKSEWDRQDVGLNLVAFDETIMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLASEGHDVSIPLDLKEYWARHGTNRYITIK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00580 308 Pfam GAGA binding protein-like family 13 308 IPR010409 -
Car06g00580 308 PANTHER - 1 308 IPR010409 -
Car06g00580 308 SMART GAGA_bind_2 1 308 IPR010409 -
Car06g00580 308 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 308 - -
Car06g00580 308 Coils Coil 53 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00580 Car-Chr6 5856875 5857898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00580 1 308 BBR or BPC Transcription factor family AT2G21240 58.710 8.45e-129 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Car06g00580 GAGA_bind 3.5e-97 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00580 - - gmx:100813103 529.25