Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00571 ATGGATTTTGTGAAGAAATGTAAGAGGGTATGGGGAAACAGCAAGAGATTGTATCCAGAAGATAGTGGAAGTGGAAGTGGAAGCTATGGAAAATTATCAAAGAGACACAAACAAAAAAACAATATTAATAAGAATAAGAAACCTCCACAAGGTTGTCTTTGTGTCTATGTTGGACCCGAGAGACAAAGATTTGTAATCAAAGTCAAAATTGCAAATCACCCTTTATTCAAAACATTTTTGGAAGATGTTGAGAATGAATTTGGTTATAGAAATGATGGTCCTCTTTGGATTCCTTGTGATGTTGACTTGTTTTATGAGGCATTGGTGGAGATTGAAGATGATGATTTGGGTTTTGTGGGTTGTAATTTTCCAATGGGTCATAAGCATAGCTCAACTTCCAATTTTTCATTGTCTTCTCCTTCTAGCTTTAATTGTGGTGAGATTACGAGGTTTTGTTATAATGTTGTAAAATGA 474 0.346 MDFVKKCKRVWGNSKRLYPEDSGSGSGSYGKLSKRHKQKNNINKNKKPPQGCLCVYVGPERQRFVIKVKIANHPLFKTFLEDVENEFGYRNDGPLWIPCDVDLFYEALVEIEDDDLGFVGCNFPMGHKHSSTSNFSLSSPSSFNCGEITRFCYNVVK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00571 157 MobiDBLite consensus disorder prediction 19 45 - -
Car06g00571 157 Pfam Auxin responsive protein 35 108 IPR003676 GO:0009733
Car06g00571 157 PANTHER SMALL AUXIN-UP RNA-RELATED 1 135 - -
Car06g00571 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 135 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00571 Car-Chr6 5738192 5738944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00571 34 109 Calmodulin-binding Proteins AT4G34750 39.474 8.60e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00571 K14488 - cam:101489648 298.13