Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00532 ATGGGTTGTAAGTGCTCTAAGTTCTCAGCATGCTGTTGGAGTACTGAGCAAGGTGGTGATCCGGTTCTGGAGGCTAACATTGATGAAAATGAAGATAATAATATTGAGGGAAATGGGTTGCCGTTGTTTCGTGAATATACAATTGATCAGCTTAGGAAGGCCACTTCTGGGTTTGCAATAGAAAATATTGTTTCTGAGCATGGAGAAAAGGCTCCGAATGTTGTCTATAAAGGGAAACTTGAAAATCAAATGCGAATTGCTATCAAACGGTTCAACAAATCAGCATGGCCAGATACCCATCAGTTTTTGgaagaggccagagctgttggtctgataaggagccaaagattggcaaatctgcttggatgttgctgtgaaggtgatgagaggttgctcgtatcagaatatatgtccaaTGATACTTTGGCAAAGCACTTGTTCCATTGGGAAACTCAACCGATGAAATGGGCAATGCGACTTAGAGTTGCTTTACACCTTGCCCAAGCTCTAGAGTACTGTACCAGCAAAGGGCGTGCTCTGTATCATGATCTAAATGCTTACAGAGTTCTTTTTGATGATGACTTTAATCCAAAACTTTCATGCTTCGGTTTGATGAAAAACAGTCGAGATGGGAAAAGTTATAGTACGAATTTGGCATTTACCCCGCCTGAATATCTCAGGACAGGTAGAGTTACTCCCGAGAGTGTAACTTATAGCTTTGGGACCCTTTTGCTTGACCTTCTCAGTGGAAAGCATATTCCTCCAAGCCATGCCCTTGACCTGATCAGGGACAGGAACCTTCGGAGTCTAACAGATTCTTGTTTAGAAGGACAATTTTCAGATGACGAGGGGACCGAATTGGTCCGTCTAGCCTCACGATGTTTACAATCTGAACCGCGAGAGCGTCCTAATCCAAAGTCACTGGTCACTGCTCTAATACCTTTACAGAAGGATTCTGAGGTTCCTTCTCATGTTCTGATGGGTATACCTGATGGTAGTGCTGCTTTTCCCCTTACTCCACTTGGGGAAGCTTGTCTACGCATGGATCTGACTTCCATTCATGAACTGCTGGAGAAAATTGGGTATAAAGATGACGAGGGCACAGCTACCGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAGGAAACATTAGACTCAAAGAAGAAGGGAGACGCTGCTTTTCGGCATAAGGACTTCAAAACCGCAATAGATGGCTATACACAGTTTATTAACGTTGGAAGCATGGTGTCTCCAACAATTTACGCCCGTCGTAGTCTCTCTTATCTCATCAGCAATATGCCAACGGAAGCACTCGGTGACGCAATGCAGGCGCAAATGATATCTCCCATTTGGTACATTGCATTTTACTTACAAGCTATCGCTCTTTTGGCATTGGGTAAGGAGAATGATGCACAAGTGGCACTTAAAGAAGGTTCATCACTTGAAACTAAAAAGAACACAAATTAG 1470 0.4014 MGCKCSKFSACCWSTEQGGDPVLEANIDENEDNNIEGNGLPLFREYTIDQLRKATSGFAIENIVSEHGEKAPNVVYKGKLENQMRIAIKRFNKSAWPDTHQFLEEARAVGLIRSQRLANLLGCCCEGDERLLVSEYMSNDTLAKHLFHWETQPMKWAMRLRVALHLAQALEYCTSKGRALYHDLNAYRVLFDDDFNPKLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLRSLTDSCLEGQFSDDEGTELVRLASRCLQSEPRERPNPKSLVTALIPLQKDSEVPSHVLMGIPDGSAAFPLTPLGEACLRMDLTSIHELLEKIGYKDDEGTATELSFQMWTNQMQETLDSKKKGDAAFRHKDFKTAIDGYTQFINVGSMVSPTIYARRSLSYLISNMPTEALGDAMQAQMISPIWYIAFYLQAIALLALGKENDAQVALKEGSSLETKKNTN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00532 489 Gene3D Transferase(Phosphotransferase) domain 1 138 329 - -
Car06g00532 489 Gene3D Tetratricopeptide repeat domain 381 489 IPR011990 GO:0005515
Car06g00532 489 ProSiteProfiles Protein kinase domain profile. 61 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00532 489 Gene3D Phosphorylase Kinase; domain 1 33 136 - -
Car06g00532 489 Pfam Protein tyrosine and serine/threonine kinase 74 311 IPR001245 GO:0004672|GO:0006468
Car06g00532 489 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 489 IPR045845 GO:0004672|GO:0009742
Car06g00532 489 SUPERFAMILY TPR-like 386 485 IPR011990 GO:0005515
Car06g00532 489 SUPERFAMILY Protein kinase-like (PK-like) 34 321 IPR011009 -
Car06g00532 489 PANTHER TPR DOMAIN KINASE 1 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00532 Car-Chr6 5417828 5423521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00532 22 337 Glycoside Hydrolase AT3G07070 33.333 2.96e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Car06g00532 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00532 K14500 - gmx:100797107 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00532 06 5417828 5423521 Car06g00532 06 5417828 5423521 ECH