Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00517 ATGCCGTGGTGGGGAAAATCTTCGTCCAAGGAGGTGAAGAGGAAGACAAACCGGGAAAGTATTTTTGAAATAATACAGCGAAAATTAAAGAGTGTTTCAGAAGAGAGGAGCAGCTACAAATCGGAAGGATCTAGGAAACATCATAGTAGCACTATCTCAAAGAAGGGATCTAGATCCTCCGGACCTTCAAGAAGAAGATCACCATCACCCTCTCCACACGTGTCCCGCTGTCTAAGTTTTGCAGAAAGTCATTATTCTCAGCCACTCCCAGTGCCAGGCTTTCCCCTTCCTACTGTTAACAACGTCAATTCTGGAATTATTGTAACGTCAAAACTGCAAAGAGCCTCAGGAGATCCTACATCTAAACCATCTCTATATTTCCCCCTGCCAGAACCTGGTTATCTAACTAAAAGGGGAGAAGTTACAGATGTGGAAGGAGATATTGCCACTGCATCTGTTTCCTGTGACAGCTCTATTGATAGTGGCGACTCATCTGATTCACATCTTGTTAGTCCTCTAGCATCTGACTGTGAAAATAGAAACAGAACCACCATTAACAATTCTTTCAGGAGTGTGGTGCACAGTGATCAATCGCCTAATACTGTCCAAAGAAAATCAAGAGCATCCTCAAAACCAGCTCATCAATTGTGCAACAAAAAGCTTTTGTCTACCTCGCCAAAAGGGGTTCCTTTGCATCTGCAAATAGGTCGTCCGGGTGGTTTTTGCAGTGCTCCAGATAGTTCAATGTCTAGTCCTTCTAGAAGTCCAATGCAGGCATATGGTCAAGAGCAAGTGTTGAGCTCAGGATTATGGACAGGAAAGCCTTATCAAGATATAGCTTCTGGGCTCTGCTCCAGTCCAGGTTCAGGTCACAATTCAAGTAATAATTCAGTTGGTGGGGATCCATCAGCATTAAAGGCACACAACTCTGAGTGTTCGCCAATACCTAGTCCCAGAATGGCAAGCCCCAGTCCCAGTTCCAGGATACAGAGCAGTACAGTCAGCCCTCGGCATCAAAAGGCTGGAGGTGCCGCAACAGAGTGTCCTACAAGACGTCCCGATGTCAGTAGACAACAAACTCATCGGTTACCGCTTCCTCCAATAAAAGTGACTAAATCTTGTCCGTTTTCTCCAACCTATTCCGCGTCTTCAACTCCTTCAGGCCCTCGAAGTCCTGCCAGAGCAGAAAATGCAACGAGCCCAGGTTCACACTGGACAAAAGGGAATTTGCTTGGAAGGGGAACATTTGGACATGTTTATCTTGGTTTCAGCAGAGAAAGGGGTGAGATGTGTGCAATGAAGGAGGTAACCCTTTTTTCTGATGACCCTAAATCACGGGAATGCGCACAGCAACTTGGACAAGAAATTGCACTGCTGAGTCAATTGCGGCATCCAAACATAGTCCAGTATTATGGGTCTGAGACGGTAGATGACAAACTTTATATATACTTGGAATACGTCTCTGGTGGCTCAATCTATAAACTGCTTCAAGAATATGGCCAACTAGGTGAAATTGCAATTCGGAATTACACTCGGCAAATTCTTTCAGGACTTGCATATTTGCATGCAAAGAACACTGTTCACAGGGACATCAAAGGAGCAAACATATTGGTGGACCCTAATGGACAGATAAAACTGGCAGATTTTGGGATGGCAAAGCATATAACAGGGCAATCTCTTCCATTTTCTTTCAAAGGAAGTCCTTATTGGATGGCACCTGAGGTTATAAAAAACTCAAATGGATGTAATCTTGCTGTTGATATATGGAGTCTGGGCTGCACTGTTTTGGAGATGGCAACAGCAAAACCTCCTTGGAGTCAGTATGAAGGGGTTGCTGCTATGTTTAAGATTGGGAACAGCAAGGAACTTCCTACAATTCCAGATCATTTATCAGAAGAAGGAAAAGATTTTGTCAGGCTTTGTTTGCAAAGGAATCCAATTCATCGGCCTTCGGCTAGTCAACTTCTAAGGCACCCATTTGTTAGAAGTGCTTTGTTAGAAAGAGTCATTCTGAATGCTGATCCTTCAGAAGCCCCATCCACCGTTATAAATGCAGTGAGATCTCTGGCCATTGGACCGGCTAAACATAATGTATGTTTAGACTCGGAAGTAGCTGGTATCCCTCCAAATAGAAGCTTCAGAGCTGGTTATGGATCAAGTAATGCACATAAACCAAAGATCGTCTCATGTCCTGTTTCGCCATCTGGGAGCCAACGTTTGCCTTCTAGATCAGTGAATCTGAGTGGAAGGATATCCTCTCCAACATGTAGGTCCCATACCGCATCTGGCCCATCTACACCGCAAACAAAGCAACCTATATTCCCACATGAAGCTCTGGGTGTGATCCAAAAGTCTCAGAATGGTTTTCAGTCAAATGGAAGCACTACTTATCAGAGTCAACAGCATGGTCAGTTTCAGAGAAATATGCAAGCTAGACATGCTTGCCACCAAGACATAATTTCATCCGAAAATAATGCTCTTACTAACTATAACAGGAGGGCCATTGAGGGAGTCCCAATAGAATTTGGTGATGGTTGCCGCCAGGATATAATTCCATCTGAAAACTATAATAGGCGAAAGGCCATTGATGAAGTCTCAAGAGAATTTCGAAATGGGAAGTCGTGTTTGGCTGATCGTGTGCCTCAACAACAGCGGGTGAGGGATAATGTGCGGCCAAATGCATCCCTAGATCAAAAGTCCAGTGCCCCAGTGCGTGGTCGCATGAATGGCTTATGA 2736 0.4441 MPWWGKSSSKEVKRKTNRESIFEIIQRKLKSVSEERSSYKSEGSRKHHSSTISKKGSRSSGPSRRRSPSPSPHVSRCLSFAESHYSQPLPVPGFPLPTVNNVNSGIIVTSKLQRASGDPTSKPSLYFPLPEPGYLTKRGEVTDVEGDIATASVSCDSSIDSGDSSDSHLVSPLASDCENRNRTTINNSFRSVVHSDQSPNTVQRKSRASSKPAHQLCNKKLLSTSPKGVPLHLQIGRPGGFCSAPDSSMSSPSRSPMQAYGQEQVLSSGLWTGKPYQDIASGLCSSPGSGHNSSNNSVGGDPSALKAHNSECSPIPSPRMASPSPSSRIQSSTVSPRHQKAGGAATECPTRRPDVSRQQTHRLPLPPIKVTKSCPFSPTYSASSTPSGPRSPARAENATSPGSHWTKGNLLGRGTFGHVYLGFSRERGEMCAMKEVTLFSDDPKSRECAQQLGQEIALLSQLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGQLGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPNGQIKLADFGMAKHITGQSLPFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATAKPPWSQYEGVAAMFKIGNSKELPTIPDHLSEEGKDFVRLCLQRNPIHRPSASQLLRHPFVRSALLERVILNADPSEAPSTVINAVRSLAIGPAKHNVCLDSEVAGIPPNRSFRAGYGSSNAHKPKIVSCPVSPSGSQRLPSRSVNLSGRISSPTCRSHTASGPSTPQTKQPIFPHEALGVIQKSQNGFQSNGSTTYQSQQHGQFQRNMQARHACHQDIISSENNALTNYNRRAIEGVPIEFGDGCRQDIIPSENYNRRKAIDEVSREFRNGKSCLADRVPQQQRVRDNVRPNASLDQKSSAPVRGRMNGL 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00517 911 MobiDBLite consensus disorder prediction 54 76 - -
Car06g00517 911 ProSitePatterns Protein kinases ATP-binding region signature. 411 434 IPR017441 GO:0005524
Car06g00517 911 MobiDBLite consensus disorder prediction 731 770 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 374 406 - -
Car06g00517 911 SMART serkin_6 405 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00517 911 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 2 771 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 30 76 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 1 20 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 282 407 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 191 262 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 155 174 - -
Car06g00517 911 SUPERFAMILY Protein kinase-like (PK-like) 403 662 IPR011009 -
Car06g00517 911 Pfam Protein kinase domain 406 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00517 911 MobiDBLite consensus disorder prediction 30 49 - -
Car06g00517 911 CDD STKc_MEKK1_plant 405 661 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 191 222 - -
Car06g00517 911 ProSiteProfiles Protein kinase domain profile. 405 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00517 911 MobiDBLite consensus disorder prediction 244 262 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 730 770 - -
Car06g00517 911 Gene3D Transferase(Phosphotransferase) domain 1 403 685 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 282 303 - -
Car06g00517 911 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 2 771 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 886 902 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 322 339 - -
Car06g00517 911 MobiDBLite consensus disorder prediction 882 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00517 Car-Chr6 5280076 5286778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00517 1 769 MAP Kinase Kinase Kinase AT1G63700 60.764 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car06g00517 Pkinase 4.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00517 K20717 - gmx:100814422 1035.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00517 06 5280076 5286778 Car06g00517 06 5280076 5286778 ECH
Car06g00517 06 5280076 5286778 Car05g02497 05 70103006 70108063 PCT