Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00509 ATGGCAGAATGGTCAGAATTTTCAAAAGGGTCTTCCCTTAATTGCCTTGAACCTAAAACTTTTAGTGCATTTCGTGGAAACGACGGTTGTCTTGTCGAGGATGGTGTTGATAGTGCTGATCATGACAAAGCTAAGCAAAAATCTTTGTTTTGTCAAATATTTTCGGTTTATGTGAAGGAGAATGGTAGCAGAGGCAATGTGAGGCCTGTGCCAGCGTTGCTTGGTGATGGACAGTTGTTAGATTTGTACCAACTGTTCTCCGTTGTGAAGGAAAGAGGTGGGTATGATGCGGTGTCGAGAAAAGGATTGTGGGATTCTGTGATTGCGGAACTTGGTTTGGACCTTCAAGTTTTGTCTTCGGTGAAATTAGTTTATGACAGATATCTGAGTGATTTTGAAAGTTGGCTTAGCAAAACTATTGAAGAGAAGAGTTTCAAAAATGGGAATCATGGGTTGTTTAAGTCGTTGCCATTAGATCTAGAGAAAGAGTTTCGAAGCCTTTTATGCTCAAATCTAAAGGACAAAAAAGATGATGATTTTGTCGAGTTAGAATCAAGTAACATCATAAAGCACATTGATTTGGTTAACCAAAAGAGTGATGGTTTTTTATTGGACACCAAAAACCGAAACAACAAATCCGAGGGTGTCCAACatgttgatggtgatggtgacgatgatgatgaAAATTTCAGTAAGGGTGTTAAGGATGATCTAGCTGCCGCTTGTGTGGAAATTTCTGGGAAGGAATTTAATTCCCGCAAACGCAAACGGGAAGAGTTATCAGGAATGGTAAACTGGATGAGGCATGTCGCAAAATATCCGCTCGAACCTGTAGCTCAGCCAATACCAGAACCATCAAAGTGGAAGGAGTATAAAGGCCATGGTTTTTTCCCTCAGATACTGAGGGCAAGAGATGCTCGGTCGGTGAGAAAGCACACAGAACCAAACAGTGGATCATCTTCTCAGAAGGTGAAGATGCATCCTGCCATGTATGATGATCATGCTGCTCTCGGTCACCACGGTACATTGAGGGTGCGATGTAGCGAAAGGCAGCCTGTCTCTGTGAAATCCCGCTGCTCTTGCTGCACCTCATCGTGTACTGGCAATGGAGCTAAATTGCCCGGTTCCAGCAATATAGAGGCAGAAAAATGTGCTGCGGAGAAATCAACTGTCAAGCAAGATACAGTTACCGAAAACAAAAAACCGACGGCCAAACAAGATGCAGCGACAGAAAAAAAGAAAACAACTGCCAAACCAGTTGTGGCAGCTGAAAAGAAAAAGTCTGAGGCATCTTGGGATCGTGCTCGCGAAAAACAAGTTTGTATAGGTCCTCTTTTCCAAGTAGAAGTCCCAGAATGGACTGGTGTAGTTTCTGAGAGTGACTCTAAATGGGTAAGCACACAAGTATGGCCTGCTAAAGATGACTCAAAACCTACTACCAAAACAGCTCTTATTGGGAGAGAAAGACGAGAAAAGTGTGGCTGCATTGTTCAAGGTTCTGTTGACTGTGTCAGATTTCATATTGCTGAAAATAGGATGAAACTGAAGCTTGAATTGGGTTCTGTGTTTTACCATTGGAGATTCGATCAAATGGGCGAGGAGGTTTCGCTTCGATGGACAGCTGATGAAGAAAAGAAATTTAAGGATGCAATGAAGCTGAAAATTCCCTCCCAAAACAAATCTTTTTGGAACAATCCATCCAAATATTTTCGAAAGAAGACAAGAACAAACATGATTAGCTATTACTTCAATGTGTATATTATTCAACTAAGAAGCTATCAGAATCGAGTGACTCCAAAGAATGCTGACAGCGACGACGATGAAGTGGAATTCGGATCTTTTGGTGATGGATTTGGGATGAAAGCTATCAAGCATCCAGCTATGGATGTCATGGAGTGTTCAGAGAACAAGCAATACTTTGATTTTGAATAG 1932 0.411 MAEWSEFSKGSSLNCLEPKTFSAFRGNDGCLVEDGVDSADHDKAKQKSLFCQIFSVYVKENGSRGNVRPVPALLGDGQLLDLYQLFSVVKERGGYDAVSRKGLWDSVIAELGLDLQVLSSVKLVYDRYLSDFESWLSKTIEEKSFKNGNHGLFKSLPLDLEKEFRSLLCSNLKDKKDDDFVELESSNIIKHIDLVNQKSDGFLLDTKNRNNKSEGVQHVDGDGDDDDENFSKGVKDDLAAACVEISGKEFNSRKRKREELSGMVNWMRHVAKYPLEPVAQPIPEPSKWKEYKGHGFFPQILRARDARSVRKHTEPNSGSSSQKVKMHPAMYDDHAALGHHGTLRVRCSERQPVSVKSRCSCCTSSCTGNGAKLPGSSNIEAEKCAAEKSTVKQDTVTENKKPTAKQDAATEKKKTTAKPVVAAEKKKSEASWDRAREKQVCIGPLFQVEVPEWTGVVSESDSKWVSTQVWPAKDDSKPTTKTALIGRERREKCGCIVQGSVDCVRFHIAENRMKLKLELGSVFYHWRFDQMGEEVSLRWTADEEKKFKDAMKLKIPSQNKSFWNNPSKYFRKKTRTNMISYYFNVYIIQLRSYQNRVTPKNADSDDDEVEFGSFGDGFGMKAIKHPAMDVMECSENKQYFDFE 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00509 643 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 643 - -
Car06g00509 643 SMART ARID_2 41 133 - -
Car06g00509 643 SUPERFAMILY ARID-like 43 137 IPR036431 GO:0003677
Car06g00509 643 SMART bright_3 45 138 IPR001606 GO:0003677
Car06g00509 643 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 643 - -
Car06g00509 643 MobiDBLite consensus disorder prediction 387 422 - -
Car06g00509 643 Gene3D - 33 147 IPR036431 GO:0003677
Car06g00509 643 CDD ARID 83 133 - -
Car06g00509 643 ProSiteProfiles ARID domain profile. 44 137 IPR001606 GO:0003677
Car06g00509 643 Pfam ARID/BRIGHT DNA binding domain 49 133 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00509 Car-Chr6 5165175 5171257 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Car06g00509 ARID 2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00509 - - gmx:100819320 723.391