Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00508 ATGGGAGGTTGTTGCTGTTGTGCTTCCAAGGAGACTGTATTGAGCGCTCCACCTGCTTACTATTATTACCCAAGAGCATCAGAGGAGCATGTTCCATTGTCCTCTCACCAGGGTGTTCCCTCTGCTTTCTCTGGAAGGCTATTGGTTGATACTAATCTAGATACTTCGAGTCCTGATACTTATAGACCACCTGCTGCTCCTATTCCTTTCAATGTGACGTTTGGTGCCACTCAGACTACACCTGTGGCTCAAGAAATTTGTTGCGACAAGAACAATACATCCTTGCTTTCTTCAGATTCTAACTCAGTTCAAGAACCATCCGGAGACGATCACGGAACCTCACCTAAGTCGGAAGAATTGAAGGAATCAGACTGCAAAGTTCAGACTGATTTAGAACTAGACTCAGCAAAGGATTCTGATATTGAACTTTCAAAGTTGGGAGAACCTATAAATTTAGTAGAAGAGGAAGATACGTGCCCAATATGTTTAGAAGATTATGATGCTGAGAATCCAAAACTGGACACAAAATGTGACCATCATTTTCACCTTGCTTGCATTCTGGAATGGATGGAAAGAAGTGAAACTTGTCCTGTTTGTGATCAGGCTATGGTCTTCAGCCCTCCCCATTGA 630 0.4302 MGGCCCCASKETVLSAPPAYYYYPRASEEHVPLSSHQGVPSAFSGRLLVDTNLDTSSPDTYRPPAAPIPFNVTFGATQTTPVAQEICCDKNNTSLLSSDSNSVQEPSGDDHGTSPKSEELKESDCKVQTDLELDSAKDSDIELSKLGEPINLVEEEDTCPICLEDYDAENPKLDTKCDHHFHLACILEWMERSETCPVCDQAMVFSPPH 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00508 209 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 208 - -
Car06g00508 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 205 IPR013083 -
Car06g00508 209 ProSiteProfiles Zinc finger RING-type profile. 159 200 IPR001841 -
Car06g00508 209 SUPERFAMILY RING/U-box 153 206 - -
Car06g00508 209 MobiDBLite consensus disorder prediction 96 110 - -
Car06g00508 209 MobiDBLite consensus disorder prediction 96 126 - -
Car06g00508 209 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 208 - -
Car06g00508 209 SMART ring_2 159 199 IPR001841 -
Car06g00508 209 MobiDBLite consensus disorder prediction 111 126 - -
Car06g00508 209 Pfam Ring finger domain 157 199 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00508 Car-Chr6 5149653 5153152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00508 1 205 C3H Transcription Factor Family AT5G41350 54.067 1.16e-67 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00508 - - gmx:100816369 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00508 06 5149653 5153152 Car06g00508 06 5149653 5153152 ECH