Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00502 ATGGCTAGACAACTTTGTGAAGATGATAACAAAACATCATCACATGGATTCATTTATCCAACGATTCAAACACAAATCCAAGGTTTTGTTTCGGATCCGGAGATGTTCAACCTCACAACAGGCATGGAAATGATAGGTTTTTCAAAACATCATCATCTTCAACATCTTGTTCCTTCTTCATCTTCAAAAACCATGAATGATTCTTCTTCAaacaacaatttctatcatcatcatcatcatcatcaacaacaacaacaaGATTTCACTTCAGAGACAACAAGTAGTGAGAATCTAAACATGTGGCAAGAAAATAGATCATTATTAGTTGATGATTCTTCATTAAGATGTGTTTTCCCTTGTGAAGGTAATGAAAGACCAAGTCAAGGACTTTCACTTTCTCTTAGTTCTACAAATCCTTCAACTATTGGCTTACAATCTTTCGAACTACGACAGAATAGTCATAATAATAATCATCATCAACAACAACAACAAATGACGACGACGAATATGTATTCGGGTCATTTTGTTCTTAAAAACTCGAAGTTCTTGGCTCCTGCACAAGAACTTCTCAATGAGTTTTGTAGTTTAGGAACTACAAAGCAAAATGATGTTGGTTTAGTACAAAAACAAAAGTCTCAAAAGTACAAACAAGGTTGGGAAGAGGATAACAACAATGGTAGTAGCAGTTCCTCAATCAAACATTCTTTAACTTCTATTGAGTTTGTTGAATTGCAAAAGAGAAAAACAAAGCTCCTTTCTATGCTTGAAGAGGTTGATAGAAGGTACAAGCACTATAGTAATCAAATGAAGAGTGTGGTGTGTTCGTTTGAAGCAGTAGCTGGGAATGGAGCAGCAAAAGTGTACTCAGCTTTGGCTTTAAAAGCTATGTCAAGACATTTTAGGTGTTTGAAAGATGGAATTTTGGAACAAATTGAAACAACAAGAAAGGCTATGGGAGAAAAAGACCCTGTTGCACCTGGAACAACAAAGGGTGAAACACCTAGGCTTAAAATCTTAGACAGAGTTTTAAGACAACAAAGAGCATTTCAACAAATCAACATGATGGAAACACATCCTTGGAGACCACAGCGTGGTCTCCCCGAACGTTCTGTTTCAATTCTTCGAGCTTGGCTTTTCGAGCACTTTCTTCATCCGTAA 1158 0.3515 MARQLCEDDNKTSSHGFIYPTIQTQIQGFVSDPEMFNLTTGMEMIGFSKHHHLQHLVPSSSSKTMNDSSSNNNFYHHHHHHQQQQQDFTSETTSSENLNMWQENRSLLVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSTIGLQSFELRQNSHNNNHHQQQQQMTTTNMYSGHFVLKNSKFLAPAQELLNEFCSLGTTKQNDVGLVQKQKSQKYKQGWEEDNNNGSSSSSIKHSLTSIEFVELQKRKTKLLSMLEEVDRRYKHYSNQMKSVVCSFEAVAGNGAAKVYSALALKAMSRHFRCLKDGILEQIETTRKAMGEKDPVAPGTTKGETPRLKILDRVLRQQRAFQQINMMETHPWRPQRGLPERSVSILRAWLFEHFLHP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00502 385 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 6 385 - -
Car06g00502 385 MobiDBLite consensus disorder prediction 55 95 - -
Car06g00502 385 Pfam Associated with HOX 176 307 IPR006563 -
Car06g00502 385 MobiDBLite consensus disorder prediction 55 72 - -
Car06g00502 385 SMART prehox3 171 309 IPR006563 -
Car06g00502 385 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00502 Car-Chr6 5063130 5066876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00502 67 385 Homeobox Transcription Factor Family AT5G41410 42.416 5.67e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00502 - - mtr:MTR_8g098815 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00502 06 5063130 5066876 Car06g00502 06 5063130 5066876 ECH
Car08g00551 08 4619407 4625622 Car06g00502 06 5063130 5066876 PCT