Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00499 ATGGCAACAAAAGAGTCAAACTCTTCTACTGCTTCTGCTTCAGCATCAGGAGACACTAAAATCAAAAGGGTTCTTACTCATGGTGGTAAATATGCACATTACAATGTGTATGGAAACTTGTTTGAGGTATCTTCTAAGTATGTTCCTCCCATTCGCCCGATCGGTAGAGGCGCTTATGGTATCGTTTGTGCTGCTGTTAATTCTGATACACATGAACAAGTTGCCATCAAGAAGATTGGTAATGCATTTGACAATATAATTGATGCTAAAAGGACTTTGAGAGAAATTAAGCTCCTTCGTCACATGGATCATCAAAATATCATTGCCATCAAGGATATCATTCGACCCCCGAAAAAGGAAGCATTTAATGATGTATACATTGTTTATGAATTGATGGACACTGATCTCCATCATATAATTCATTCTGACCAACCTCTTCGCGAAGAACATTGTCAGTACTTCTTATATCAGCTGTTACGCGGGCTGAAATATGTGCACTCGGCTAATGTTTTGCACCGCGATCTTAAACCGAGTAATTTACTAATGAATGCAAACTGTGACCTTAAAATTGGTGACTTCGGTTTGGCAAGGACAACATCTGAGACAGATTTCATGACTGAGTATGTTGTCACAAGATGGTACCGTGCCCCGGAATTGCTTCTCAATTGTTCTGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAACCTTTGTTTCCTGGCAAAGACTATGTTCATCAACTAAGGCTTATCACAGAGTTAATAGGTTCACCTGATGATGCCAGCCTTGGTTTTCTCCGAAGCGACAATGCTAGAAGATATTTTAGACAGTTTCAACAATACCGGAAGCAAAAATTCTCGTCCCGATTCCCAAACATGTTGCCTGAGGCACTTGATCTCTTAGAAAAGATGCTTATCTTTGATCCAAACAAACGCGTTACAGTTGATGAGGCACTTTGTCACCCATATCTTTCATCACTTCACAACATCAATGAGGAGCCAGTTTGTCCAAGGCCTTTCACTTTTGATTTTGATCAGCCAACGTGCACTGAAGAGGCTATCAAGGAGCTCATATGGAAGGAATCTGTGAAGTTCAATCCGGATCCACCCTGTCAGTAA 1149 0.4064 MATKESNSSTASASASGDTKIKRVLTHGGKYAHYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSDTHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHQNIIAIKDIIRPPKKEAFNDVYIVYELMDTDLHHIIHSDQPLREEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYFRQFQQYRKQKFSSRFPNMLPEALDLLEKMLIFDPNKRVTVDEALCHPYLSSLHNINEEPVCPRPFTFDFDQPTCTEEAIKELIWKESVKFNPDPPCQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00499 382 CDD STKc_TEY_MAPK 41 377 - -
Car06g00499 382 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 21 381 - -
Car06g00499 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Car06g00499 382 Pfam Protein kinase domain 52 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00499 382 Gene3D Phosphorylase Kinase; domain 1 31 371 - -
Car06g00499 382 ProSitePatterns Protein kinases ATP-binding region signature. 54 78 IPR017441 GO:0005524
Car06g00499 382 SMART serkin_6 48 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00499 382 ProSiteProfiles Protein kinase domain profile. 48 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00499 382 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 21 381 - -
Car06g00499 382 ProSitePatterns MAP kinase signature. 83 186 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car06g00499 382 SUPERFAMILY Protein kinase-like (PK-like) 51 341 IPR011009 -
Car06g00499 382 Gene3D Transferase(Phosphotransferase) domain 1 132 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00499 Car-Chr6 5032697 5035738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00499 8 377 MAP Kinase Gene Family AT4G01370 80.323 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Car06g00499 Pkinase 2.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00499 - - gmx:100785306 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00499 06 5032697 5035738 Car06g00499 06 5032697 5035738 ECH
Car08g00209 08 1658597 1661667 Car06g00499 06 5032697 5035738 PCT