Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00498 ATGATTATCTCAGAGAAGAACCGCAAAGAGATCTGCAAATACCTGTTTCAAGAAGGTGTATGTTACGCTAAGAAGGATTTCAATTTGGCTAAGCATCCCGAAATCGATGTTCCTAATTTGCAGGTGATTAAGCTTATGCAGAGTTTCAAATCGAGGGAATATGTTAGAGAAACCTTCGCTTGGATGCACTATTACTGGTTCCTCACAAACGATGGAATCGAGTTTCTTAGGACTTATCTTAATCTACCATCGGAAATTGTTCCTGCTACTTTGAAGAAACAGGCTAAGCCACCTGGTAGACCATTTGGTGGCCCACCCGGCGATCGCCCTAGGGGTCCACCACGTTTTGAAGGTGAACGTAGATTTGGAGGCGACAGAGATGGGTATCGTGGAGGACCACGAGGACCTGCCGGTGAGTTTGGAGGAGACAAAGGAGGAGCTCCTGCTGATTACAGACCCTCATTTGGAGGTCCTGGTGGAAGGCCTGGATTCGGTCGTGGATCTGGTGGTTTTGGGGCTCCAACCAGCTCAGATGCTTAA 540 0.4759 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPPGDRPRGPPRFEGERRFGGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSDA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00498 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
Car06g00498 179 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 174 - -
Car06g00498 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 174 IPR037447 -
Car06g00498 179 Gene3D - 1 104 IPR036388 -
Car06g00498 179 MobiDBLite consensus disorder prediction 112 128 - -
Car06g00498 179 MobiDBLite consensus disorder prediction 91 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00498 Car-Chr6 5028285 5030713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00498 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.935 8.99e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00498 K02947 - gmx:100500445 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00498 06 5028285 5030713 Car06g00498 06 5028285 5030713 ECH
Car08g00208 08 1656408 1658304 Car06g00498 06 5028285 5030713 PCT