Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car06g00497 | ATGGGACATCATTCTTGCTGCAATCAACAGAAGGTTAAGAGAGGTCTTTGGTCCCCTGAAGAAGATGATAAACTCATCACTTATATCACCTCTCATGGCTATGGCTGTTGGAGTGAAGTTCCTGAAAAAGCTGGGCTTCAAAGGTGTGGTAAGAGCTGTAGGTTGAGATGGATAAATTATTTGAGACCTGATATTAGAAGAGGAAGGTTTACACCTGATGAGGAGAAGTTAATTATAACCCTTCACAGTGTTGTTGGCAACAGATGGGCACATATtgcaagccacttgcctggtagaactgacaatgaaataaagaactattgGAATTCTTGGATCAAAAAGAAAATAAGAAAGCATTCTTTGTCCACCTCTTCAACCACCAACATTACACAAAATCTTGTTCATCATAATTCTAATAATAAACTAGAACACTTTTCCATCCAAGAGAATAATTTAGCAACACCAATAGCAAAACCATCACCATTTCAAGAAACCACCTTGTTTTCTCCCACATGTCCTTTGTTCATGTTTGAGCCAAGTAATAATCTCCAAACAGAATACTTTCAAATTCAAGAATCTATTGGTTTGAATTCTGAAACATGGAATCAAATTCAATCATTACCTCCTCCAATATCATCAACTTTTACAATGGACACTTTGAATTATCTACCACCTTTGATAGAGAATGTTGAAAACATGGTACCAATAAAATCTTGTAGCATGGAAGAGAAACATGGAGATAGAGATCACCAAGTACTAGAATGTTTTCAGAAGCAAGAGATGAATAATAACATTGATGAATGGGTAGAAACACATTTacaacaacaacaacaacaaTGTCCTAGTAACTTTATTTTCTGGGATAATATTGTTATTGAAGGACATGATCATCATGAACTTGGTGGTGGGGAAGAAGAAGTAGAACCATCCAATTCATCTAATATAATGGGAACAAACACAGTGATTTTTCCTTTTGCTTCTTCATCTTTTTGA | 993 | 0.3313 | MGHHSCCNQQKVKRGLWSPEEDDKLITYITSHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPDEEKLIITLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKHSLSTSSTTNITQNLVHHNSNNKLEHFSIQENNLATPIAKPSPFQETTLFSPTCPLFMFEPSNNLQTEYFQIQESIGLNSETWNQIQSLPPPISSTFTMDTLNYLPPLIENVENMVPIKSCSMEEKHGDRDHQVLECFQKQEMNNNIDEWVETHLQQQQQQCPSNFIFWDNIVIEGHDHHELGGGEEEVEPSNSSNIMGTNTVIFPFASSSF | 330 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car06g00497 | 330 | Coils | Coil | 258 | 278 | - | - | |
Car06g00497 | 330 | CDD | SANT | 69 | 112 | IPR001005 | - | |
Car06g00497 | 330 | PANTHER | MYB DOMAIN PROTEIN 55 | 1 | 324 | - | - | |
Car06g00497 | 330 | PANTHER | MYB TRANSCRIPTION FACTOR | 1 | 324 | - | - | |
Car06g00497 | 330 | CDD | SANT | 17 | 61 | IPR001005 | - | |
Car06g00497 | 330 | SMART | sant | 13 | 63 | IPR001005 | - | |
Car06g00497 | 330 | SMART | sant | 66 | 114 | IPR001005 | - | |
Car06g00497 | 330 | Gene3D | - | 6 | 66 | - | - | |
Car06g00497 | 330 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Car06g00497 | 330 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - | |
Car06g00497 | 330 | Gene3D | - | 69 | 143 | - | - | |
Car06g00497 | 330 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Car06g00497 | 330 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Car06g00497 | 330 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Car06g00497 | 330 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Car06g00497 | 330 | Pfam | Myb-like DNA-binding domain | 67 | 111 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car06g00497 | Car-Chr6 | 5022579 | 5024313 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car06g00497 | 1 | 292 | MYB Transcription Factor Family | AT1G63910 | 46.875 | 2.07e-87 | 265 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Car06g00497 | Myb_DNA-binding | 3.6e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car06g00497 | K09422 | K02947 | gmx:100803556 | 396.741 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car06g00497 | 06 | 5022579 | 5024313 | Car06g00497 | 06 | 5022579 | 5024313 | ECH | |
Car08g00207 | 08 | 1649769 | 1652989 | Car06g00497 | 06 | 5022579 | 5024313 | PCT |