Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00491 ATGGATGAGCTTGCATTCTTAATGGATTGGGATTTTGAAGCTTTCAATGAACCCCCAACAACCAATAATCCTTATTATTTTTCTCAACAAGAAAATGAATTATTTGGTAATTTTCCAGAATTCTCACAAACCACCAATGTCTTTATTGATGAACTTGAACAAATTTCCAAACCTTTTTACCCTCTTTCATCACAAACCAATATAGTTACAAATTCTCTAACTATCCCTAAAGAAGAACTCAAAGAAATTAAAGCCTCGGAGAGAATAGCTTCTCAAGATTTGCAAGTTCCCGCAGCATCTAAATGTAAAAGAAGCAAGAAAAAACAGAACAAGAATATTGTTAAAAAGGTTGTTGCAGAAGATGGTGTACTTTGTGATGCATGGTCATGGAGAAAATATGGACAAAAACCAATAAAGGGTTCACCCTATCCTCGAAGCTACTATAAATGTAGCACTTCCAAAAAATGTTTAGCAAGAAAACAAGTTGAAAAAAGCCATTTGGATCCAAAAGTTTATTTAGTTACATACAATGCAGAACATAATCATCCACAACCAACTAGAAGAAATTCATTAGCAGGAATCACTAGGAAGAACAATGTCTTAGTTACAAATTCTTCAAGAAAATTAATTATTGACCAAAAAACTTGTTCTTTAAATTCCTCCATAGCAACTCATGACTCTCCAAAGACACATTTGGTGAAAGTTGAAGATGAGGTACTTGTTACAAGTGTGCAACAAAGTAAGGGATTGGTGAAATATGAGGAAGATCATGATCTTCTAGAGTGGTTGAATAGTGCTCAATTAAGTGATGATGGTTGGATTCCAAGCAAAGAGTTAGATGAATTTATTGGACTAGAGTATCAATCACATGCATAG 876 0.3379 MDELAFLMDWDFEAFNEPPTTNNPYYFSQQENELFGNFPEFSQTTNVFIDELEQISKPFYPLSSQTNIVTNSLTIPKEELKEIKASERIASQDLQVPAASKCKRSKKKQNKNIVKKVVAEDGVLCDAWSWRKYGQKPIKGSPYPRSYYKCSTSKKCLARKQVEKSHLDPKVYLVTYNAEHNHPQPTRRNSLAGITRKNNVLVTNSSRKLIIDQKTCSLNSSIATHDSPKTHLVKVEDEVLVTSVQQSKGLVKYEEDHDLLEWLNSAQLSDDGWIPSKELDEFIGLEYQSHA 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00491 291 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 255 IPR044810 GO:0003700
Car06g00491 291 Pfam WRKY DNA -binding domain 126 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00491 291 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 255 - -
Car06g00491 291 SUPERFAMILY WRKY DNA-binding domain 120 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g00491 291 SMART WRKY_cls 124 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00491 291 Gene3D WRKY domain 107 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g00491 291 ProSiteProfiles WRKY domain profile. 119 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00491 Car-Chr6 4959432 4961318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00491 1 283 WRKY Transcription Factor Family AT4G23550 35.505 1.50e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car06g00491 WRKY 7.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00491 K13426 - gmx:102663255 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00491 06 4959432 4961318 Car06g00491 06 4959432 4961318 ECH