Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00488 ATGGATTCAAATCCGAAACGGGAATGGTCCATCAACGACTTCGAGATCGGAAAACCACTCGGGAAAGGGAAATTCGGCAGAGTCTATGTCGCCAGAGAAGTTAAGAGTAAATACGTGGTTGCATTGAAGGTTATCTTTAAGGAACAACTTGAAAAGTATAGAATTCAGCATCAACTAAGGAGGGAAATGGAGATACAGATAAGTCTTAAACATCCAAACATCTTGCGTCTCCATGGTTGGTTTCATGATTCTGAACGTGTTTACTTGATTCTTGAATACGCTCATAATGGTGAGCTATACAAGGAGCTTAGCAAAAAAGGTCATTTCTCAGAGAAGCAAGCTGCAACGTACATTTTAAGCCTCACAGAGGCATTGGCATATTGTCATGAGAAGCATGTTATTCACAGGGATATCAAGCCTGAAAACTTGTTGCTTGACCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCTGTACAATCTAAAAGCAAAAGACAAACCATGTGTGGAACTTTGGATTATCTAGCTCCGGAAATGGTAGAAAACAAAGCTCATGATTATACAGTTGATCATTGGACTTTGGGTATCCTTTGTTATGAGTTCCTCTATGGTGTTCCTCCATTTGAGGCTGAGAGTCAAGCTGATACCTTCAAAAGAATAGTAAAGGTTGATCTGAGCTTCCCTCCTACCCCTATTGTTTCTTCAGATGCCAAAAATCTGATAAGTCGGCTGCTGGTAAAAGATTCCTCAAGAAGGCTCTCGCTTCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCTTATGGGTGTTTGTGAGTAG 831 0.4067 MDSNPKREWSINDFEIGKPLGKGKFGRVYVAREVKSKYVVALKVIFKEQLEKYRIQHQLRREMEIQISLKHPNILRLHGWFHDSERVYLILEYAHNGELYKELSKKGHFSEKQAATYILSLTEALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSKSKRQTMCGTLDYLAPEMVENKAHDYTVDHWTLGILCYEFLYGVPPFEAESQADTFKRIVKVDLSFPPTPIVSSDAKNLISRLLVKDSSRRLSLQKIMEHPWIIKNANLMGVCE 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00488 276 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524
Car06g00488 276 Pfam Protein kinase domain 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00488 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Car06g00488 276 SUPERFAMILY Protein kinase-like (PK-like) 7 268 IPR011009 -
Car06g00488 276 CDD STKc_Aurora 13 265 - -
Car06g00488 276 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Car06g00488 276 PIRSF ILK 2 269 - -
Car06g00488 276 ProSiteProfiles Protein kinase domain profile. 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00488 276 SMART serkin_6 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00488 276 Gene3D Transferase(Phosphotransferase) domain 1 98 272 - -
Car06g00488 276 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 3 274 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00488 Car-Chr6 4929713 4932932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00488 14 268 CBL-interacting serine-threonine protein kinases AT5G10930 39.695 1.83e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Car06g00488 Pkinase 7.8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00488 K08850 - gmx:100775802 514.998