Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00481 ATGGAACAGAAAAGCTTTCTGTTATCAGCGCTGAGTGTTGGGGTTGGAGTTGGAGTTGGAATTGGTTTAGCTTCTGGACAATCCGTTTCTAAATGGGGACCTAATTATTCTTTCCCATCAAACGCCGTTACTGCTGATAAATTTGAGCATGAAATGCTCCGTCAAGTTGTTGACGGTAGAGAAAGCAACGTTACTTTCGATAAATTCCCTTATTATCTAAGTGAGCAAACGAGGGTTTTGTTGACAAGTGCTGCTTATGTTCATTTAAAGCATGCTGAAGTTTCTAAATATACGCGTAATCTTGCTCCTGCTAGTAGAACTATTCTCCTCTCAGGCCCTGCAGAACTTTACCAACAAATGCTTGCTAAAGCTTTAGCTCATTACTTTGAGGCCAAGTTGCTTCTCTTGGATTTAACTGACTTTTCATTGAAGATTCAGAGTAAATATGGTTCTGGCAACAAAGAATATTCTTTCAAAAGATCCACATCAGAGTCAACTTTGGAGAAGCTATCTGACCTATTTGGCTCATTTTCAATCTTTCCACAAAGGGAGGAACCTAAAGgaaaaatgcacaggcaaagcagtggaatggacctacaatcaatGGGGGGTGAAGCATCTTGTAATCCTCCAAAGCTCCGTAGGAATGCTTCTTCCTCTTCAAATATTAGTGGCCTTACTTTGCAAAGCAATTCTACAAATTCAGCTCCTTTGAAGCGCACTTCCAGCTGGTCTTTTGATGAAAAACTACTTATACAGTCTCTTTACAAGGTTCTGCTTTCTGTGTCAAAAAGAGATCCGATAGTGCTATATCTGAGGGATGTTGATAGATTATTATGTAGATCACAACAGATATATAACATGTTCCAAAAAATGTTGAAGAAACTTTCCGGGCCGATTCTGATTCTTGGTTCACGAGTTCTAGATTCTGGTAAGGAATTTGAAGAGATCGATGAGAAACTTACTTTGCTCTTCCCGTACGATATAGAAATCAGACCTCCAGAAGACGAATCACGTCTTGTCAGCTGGAAGTCTCAATTGGAAGAGGATATGAAGATGATTCAAGTTCAGGATAACAAGAATCACATCACGGAAGTGCTTGCAGCCAATGATCTTGATTGCGATGACTTGGATTCCATCTGTGTGGCAGACACAATGGTTCTCAGTAACTATATAGAAGAGATTATTGTGTCAGCATTATCTCACCATTTGATGAAAAACAAAGATCTTGAATACAGAAATGGGAAGCTAATTATTTCTTGCAATAGTTTGTCGCATGCATTGAATATATTCCAAAAGAAGGAAAAATTCTGTGGAAAAGATACATCAAAGTCAGAAGATCAAGCTCTAAAGTCTGAGACTCCAAGTGTTGGAGAGACTGTTGTGAAACCAGCAGTGAAGGCTGAAAATGCTGCTCCTGAAAAAAAGGCTGAAGCAGCAGTATCAACTTCAGTTGCAAAGACAGGCGTTGAAAAATCGGTTCCACCATCAAAAGCTTCTGAAGCTTCTCCTGACAATGAATTTGAGAAGCGAATAAGGCCTGAAGTTATACCAGCAAATGAGATTGATGTCACCTTCTCTGATATTGGTGCCTTAGAAGAGACAAAAGAATCTCTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCAGATCTTTTCACCGGAGGACTTCTAAAGCCATGCAGAGGAATATTGTTATTTGGGCCTCCTGGCACTGGGAAAACAATGCTCGCAAAAGCCATTGCAAAGGAAGCTGGAGCAAGTTTCATTAATGTGTCCATGTCTACCATCACTTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGCGCTTTATTCACGCTTGCAGCCAAAGTCTCCCCAACCATTATATTTGTTGATGAGGTCGATAGCATGCTGGGGCAAAGAACGAGAGTCGGGGAGCATGAAGCTATGCGGAAAATAAAGAATGAATTTATGTCACATTGGGACGGACTCATGACAAAACAAGGAGAGCGCATCCTTGTTCTTGCAGCAACCAATAGGCCATTTGATCTGGATGAAGCTATTATAAGGCGATTTGAAAGGAGAATCATGATAGGACTACCATCTGTTGAGAATAGGGAAAAGATATTAAGGACTCTTTTGGCAAAGGAGAAGGTGGACAAGGAAATCGATTTTAAGGAACTTGCCACCATGACAGAAGGATATACCGGAAGTGATCTTAAGAACTTCTGCACAACTGCTGCTTATCGGCCAGTTAGAGAGTTGATTCAGCAAGAGAGATTAAAGGATCTGGATAAGAAACAGAAAGCTACCAAGGAACATAACAAAGATATCCAAGACAGACAAGAAGAACAATCTATGGTAGGGAATACCCAAGGAGCAAAAGAGAAACTTCAACACGAAAGAGTCATTACTCTTAGGCCATTGAATATGCAGGATTTCAAAGAGGCCAAGAATCAGGTTGCTGCAAGCTTTGCAGTTGAGGGAGCTGGAATGAGTGAGTTAATGCAGTGGAATGAATTATACGGAGAAGGCGGTTCTAGGAAGCAAAAGCAGTTGTCATACTTCCTGTGA 2559 0.3994 MEQKSFLLSALSVGVGVGVGIGLASGQSVSKWGPNYSFPSNAVTADKFEHEMLRQVVDGRESNVTFDKFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQMLAKALAHYFEAKLLLLDLTDFSLKIQSKYGSGNKEYSFKRSTSESTLEKLSDLFGSFSIFPQREEPKGKMHRQSSGMDLQSMGGEASCNPPKLRRNASSSSNISGLTLQSNSTNSAPLKRTSSWSFDEKLLIQSLYKVLLSVSKRDPIVLYLRDVDRLLCRSQQIYNMFQKMLKKLSGPILILGSRVLDSGKEFEEIDEKLTLLFPYDIEIRPPEDESRLVSWKSQLEEDMKMIQVQDNKNHITEVLAANDLDCDDLDSICVADTMVLSNYIEEIIVSALSHHLMKNKDLEYRNGKLIISCNSLSHALNIFQKKEKFCGKDTSKSEDQALKSETPSVGETVVKPAVKAENAAPEKKAEAAVSTSVAKTGVEKSVPPSKASEASPDNEFEKRIRPEVIPANEIDVTFSDIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLMTKQGERILVLAATNRPFDLDEAIIRRFERRIMIGLPSVENREKILRTLLAKEKVDKEIDFKELATMTEGYTGSDLKNFCTTAAYRPVRELIQQERLKDLDKKQKATKEHNKDIQDRQEEQSMVGNTQGAKEKLQHERVITLRPLNMQDFKEAKNQVAASFAVEGAGMSELMQWNELYGEGGSRKQKQLSYFL 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00481 852 Gene3D - 49 355 IPR027417 -
Car06g00481 852 MobiDBLite consensus disorder prediction 758 795 - -
Car06g00481 852 MobiDBLite consensus disorder prediction 212 237 - -
Car06g00481 852 CDD AAA 562 695 - -
Car06g00481 852 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 852 - -
Car06g00481 852 Pfam ATPase family associated with various cellular activities (AAA) 564 694 IPR003959 GO:0005524|GO:0016887
Car06g00481 852 Gene3D - 696 776 - -
Car06g00481 852 MobiDBLite consensus disorder prediction 758 778 - -
Car06g00481 852 MobiDBLite consensus disorder prediction 468 513 - -
Car06g00481 852 MobiDBLite consensus disorder prediction 185 237 - -
Car06g00481 852 Pfam AAA+ lid domain 718 760 IPR041569 -
Car06g00481 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 377 IPR027417 -
Car06g00481 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 763 IPR027417 -
Car06g00481 852 Coils Coil 756 779 - -
Car06g00481 852 SMART AAA_5 560 697 IPR003593 -
Car06g00481 852 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 852 - -
Car06g00481 852 Gene3D - 523 695 IPR027417 -
Car06g00481 852 ProSitePatterns AAA-protein family signature. 667 686 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00481 Car-Chr6 4842709 4848404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00481 524 756 Calmodulin-binding Proteins AT3G56690 38.559 5.20e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00481 - - mtr:MTR_8g099065 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00481 06 4842709 4848404 Car06g00481 06 4842709 4848404 ECH