Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00479 ATGAGTTCAAGCGATGCGAATAGACAACGAGGTTCATCAACAACGGTGGAGTGCAAATCTCAGTATAAAGCTCCTTTATTTTTGGCATACCAGAGTTTGGGCTTTCTGTTTGGTGACATCAGCCTATCCCCTCTATATGTCTATCAAAGTATATTTTCTGGAAGACTGAAACATGTTCAAAATGAGGATGCAATATTTGGTGCATTTTCTTTGATTTTTTGGACTCTCTCTCTTATTTCTATGTTCAAGTATGCTGTTATCATGTTGAGTGCAGATGATAATGGTGAAGGGGGAACCGTTGCTTTGTATTCGCACCTTTGCAGAAATGCGAAATTTTGTTTGCTTCCTAATCATCAAGCATCTGATGAGGAGCTTTCTACATATCGCAAACCTGGTTACTCAAATAGAAATATACCAACCTCATCTTTGAAAAAATTCATTGAAAAAAATAAGAACACTAAAATTGTTTTGCTTGTTTTTGTTTTACTTGGTGCTTGCATGGTAATTTGTGTTGGCGCACTCATGCCTGCCATTTCAGTTCTTTCATCTGTTGAAGGGTTGAAAATTGAAGCGAAGATTAAAAACGAAAGTATTGTGCCTCTTATTTCTTGTGTTCTACTGGTTGGACTCTTTGTTCTGCAACACCGTGGCGCCCACACGGTTGCCTTCATGTTTCCTCCCGTAATCATCCTATGGTTGCTATCTATTTTCGCGATTGGCATTTACAATGTCATCAAGTGGAATCCCAGAATATATCAGGCTCTTTCTCCATATTATATATTCAAGTTCTTTTTGGTTACAGGAAAAGATGGTTGGGTTAATCTTGGAGGGGTATTTTTGTGTGTTGCAGGGACTGAAGCTATGTTTACAGACCTTGGATACTACAAAAAAGCCCCTGTAAGGGCTGCATTTTCTTTTGTCATTTACCCATGTCTAATTCTTCAATACATGGGGCAGGCTGCTTTTCTATCACAGAATTTATCTGCAGTACCTATAAGCTTTTATGCTTCTATTCCAGatgtcctcttttggccggtattcgtggtggctgctttggcagcaatagttgcaagtcaggctgtcatctcttcgacattctcaattgttcaacaatgccatgcatttgagtgtttccctcgtgttaaggcagtacattccAGAAGGTGGATCGATGGTCAGACGTATATACCAGAGATAAACTGGATTCTTATGATAATCAGCCTGGCTGTGATAGTTGGGTTCGGAGACACAAACCATATAGGGTATGCTTATGGGATTGCATGTCTGATTGTTGCATTTGTGACCACATGGTTGACCTCTCTCGTCATCAACCTTGTATGGCATCAAAGTCTTATAGTTGCTATTGCATTTCTCTTATTCTTTGGTTCGATAGAGGTTTTCTTCCTATCGTCCTATTGCATGAAAATCCCAAAAGGTGGATGGGTTCCAATTGTGCTCTCTGCAGTCTTCATGGTTGTTATGTATGTGTGGCATTATGGTTCTAGAAAGAAGTATTTTTTTGATATGCATAACAAAGTTTCAATGAGGGGGATCCTTACATTGGGTCCTAGTCTTGGGATAGTTAGGGTTCCAGGAATGGGTCTTATCTATACCGAATTGGCTACTGGAGTCCCTGCCAGTTTTACTCATTTCTTGACAAATCTGCCAGCTTTCTACCAAGTGGTTGTTTTTGTTTGTGTTAAGACTGTGTCTGTGCCTTCTGTGCCCCATGCAGAACGTTATCTCATTGGCCGAATTGGTCCAAAATCCTATCGATTGTATCGGTGCATTGTTCGAAATGGCTACAAAGACGTTTATAGTCACGAAAATGATTTTGAAAATGAACTGGTGATGAGCATAGCAGAATTCATTCAATTGGAAGCTGAAGGTTCTGGAAACCTAGATGGTACTGGGGATGGCCGTATGGCGGTTGTTAGGACGTCTGGTAAGTTTGGAACAAGATTGCGAATGTCAGAATCTGCTGGTTTTGAAGGTGACAGTAACAATCTTCCCGGAGCTTTGACTGTTAGTAGCAGTAAATCTTCGACATTGAAGAAGCTGCAGGCCATGTATGAGCAGGAATCACCTGAACTCAACACTAGACGGCGGATTAGATTTGAGGTTCTAAATACAATATATAGAGATCCACATGTCAAGGAAGAGCTCATGGAACTTGTGGAAGCCAAGCGCGCCGGAGCAGCATATGTAATAGGTCATTCTCATGTAAAGGCCAAGTGGAACTCTTCATTTGCGAAGAAGTTTGCTATAAATCTCTACTCTTTTCTTCGAAAAAATTGCCGTTCCCCTGCTGTTGGACTAAACATTCCCCAGACTTGTCTGATTAAGGTAGGAATGAATTACCATGTCTAG 2370 0.3802 MSSSDANRQRGSSTTVECKSQYKAPLFLAYQSLGFLFGDISLSPLYVYQSIFSGRLKHVQNEDAIFGAFSLIFWTLSLISMFKYAVIMLSADDNGEGGTVALYSHLCRNAKFCLLPNHQASDEELSTYRKPGYSNRNIPTSSLKKFIEKNKNTKIVLLVFVLLGACMVICVGALMPAISVLSSVEGLKIEAKIKNESIVPLISCVLLVGLFVLQHRGAHTVAFMFPPVIILWLLSIFAIGIYNVIKWNPRIYQALSPYYIFKFFLVTGKDGWVNLGGVFLCVAGTEAMFTDLGYYKKAPVRAAFSFVIYPCLILQYMGQAAFLSQNLSAVPISFYASIPDVLFWPVFVVAALAAIVASQAVISSTFSIVQQCHAFECFPRVKAVHSRRWIDGQTYIPEINWILMIISLAVIVGFGDTNHIGYAYGIACLIVAFVTTWLTSLVINLVWHQSLIVAIAFLLFFGSIEVFFLSSYCMKIPKGGWVPIVLSAVFMVVMYVWHYGSRKKYFFDMHNKVSMRGILTLGPSLGIVRVPGMGLIYTELATGVPASFTHFLTNLPAFYQVVVFVCVKTVSVPSVPHAERYLIGRIGPKSYRLYRCIVRNGYKDVYSHENDFENELVMSIAEFIQLEAEGSGNLDGTGDGRMAVVRTSGKFGTRLRMSESAGFEGDSNNLPGALTVSSSKSSTLKKLQAMYEQESPELNTRRRIRFEVLNTIYRDPHVKEELMELVEAKRAGAAYVIGHSHVKAKWNSSFAKKFAINLYSFLRKNCRSPAVGLNIPQTCLIKVGMNYHV 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00479 789 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 18 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car06g00479 789 Pfam K+ potassium transporter 30 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car06g00479 789 PANTHER POTASSIUM TRANSPORTER 3 18 789 - -
Car06g00479 789 TIGRFAM kup: potassium uptake protein 28 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00479 Car-Chr6 4817884 4826028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00479 26 789 Inorganic Solute Cotransporters AT4G23640 62.109 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00479 K03549 - gmx:100777998 1334.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00479 06 4817884 4826028 Car06g00479 06 4817884 4826028 ECH