Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00471 ATGAACGACGAAGATGTCTCCAAGCAAATCCATCAGATGGTCAGGTTTATCCGTCAGGAAGCCGAAGAAAAAGCCAGCGAGATCTCTGTCTCCGCCGAAGAGGAATTCAATATCGAGAAGCTTCAATTGGTCGAAGCAGAGAAGAAGAAGATCAGACAAGAATACGAACGGAAAGAGCGCCAAGTTGAAATTCGAAAGAAGATTGAGTACTCAATGCAGCTGAATGCTTCTCGGATCAAAGTTCTTCAAGCTCAAGATGACATTGTTAATTACATGAAAGAAACTGCAGCCAAGGAACTTTTGAATGTGAGCCACCATCACATTGTTGAGGATCTTTTGCATGTGGGCCATCATGAGTACAGAAACCTTCTAAAAGGTCTCATTGTTCAGAGTTTGCTAAGACTGAAAGAACCTTCTGTCTTGTTGAGATGTCGGAAACATGACTTGCACATGGTAGAGCATGTGCTGGATGAAGCCACAGAAGAGTATGCTGAAAAGGCAGGTGTTGATCCACCCGAGATCATTGTTGACCACAATGTCTATCTTCCACCTGCACCCAAGCATCACAATACTCACGATCCCTACTGCTCTGGTGGAGTGGTGTTGGCTTCTCGTGATGGAAAGATTGTGTGTGAAAATACTCTTGATGCACGTCTGGATGTAGTGTTCCGTAAAAAGCTTCCAGAGATCCGAAAGCTGCTCTTTGGACAAGTTGCTGTTTGA 723 0.4426 MNDEDVSKQIHQMVRFIRQEAEEKASEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKERQVEIRKKIEYSMQLNASRIKVLQAQDDIVNYMKETAAKELLNVSHHHIVEDLLHVGHHEYRNLLKGLIVQSLLRLKEPSVLLRCRKHDLHMVEHVLDEATEEYAEKAGVDPPEIIVDHNVYLPPAPKHHNTHDPYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKLLFGQVAV 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00471 240 Coils Coil 38 61 - -
Car06g00471 240 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 239 IPR002842 GO:0033178|GO:0046961|GO:1902600
Car06g00471 240 Gene3D - 92 239 IPR038495 -
Car06g00471 240 Hamap V-type proton ATPase subunit E [atpE]. 8 236 IPR002842 GO:0033178|GO:0046961|GO:1902600
Car06g00471 240 SUPERFAMILY V-type ATPase subunit E-like 106 236 - -
Car06g00471 240 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 239 - -
Car06g00471 240 Pfam ATP synthase (E/31 kDa) subunit 16 235 IPR002842 GO:0033178|GO:0046961|GO:1902600
Car06g00471 240 Gene3D - 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00471 Car-Chr6 4743408 4746931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00471 1 240 Primary Pumps ATPases(2) AT4G11150 72.917 7.56e-122 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00471 K02150 - gmx:100500452 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00471 06 4743408 4746931 Car06g00471 06 4743408 4746931 ECH