Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00470 ATGAAATTTCTTCACATTTCATGTTTTATTATGTGCATATTGTGTTCGATACTATGTCAACAAGGGAATTGTGAACCTGTTGAAGATAAAGAGGTTTTACTTGAGTTTGTGAAAAAGTTCCCACCTTCAAGGACTCTGAATTGGAACGAGAGTTCTTCTGTGTGTGATTTTTGGACTGGTGTTACTTGCAATGAAGATAGGTCTAGAGTAATAGCTATTAGACTACCAGGTGTTGGATTTCATGGAACCATTCCACCTTTTACCATTAGTAACCTCCCAGCTCTTCAAATTCTGAGTCTTAGATCCAATTTCATAACTGGGTTTTTTCCTTCTGATTTTTCCAATCTAAAAAACTTGTCTTTTCTTTATCTTCAGTTCAATAATTTGTCTGGTCCTTTACCTGATTTCTCACCTTGGAAGAATCTCTCTGTTGTTAATTTGTCTAATAACAAGTTCAATGGCACTATTCCTTTATCTCTTACTAATTTGACTCAGCTTGCTGGTTTGAACCTTGCAAACAACTCTCTTTCTGGTGAAATTCCTGATCTTGGTTTGTTAAGATTGCAGGTGTTGAATTTGTCTAACAATGATTTACATGGCACTGTGCCTAAATCTCTCCAGAGGTTTCCTGATTCAGCATTCATAGGGAATAACATTTCTCTTGGAAATTCTACTGCTGTTTCTCCGGTGAATGCACCGGTTTATGAGCCGCCTTCGGTCGCTGAGAAACATGGCAGGCTCAGTGAAACAGCTCTGCTGGGAATTATTGTTGCTGGTATTGTTATAGGGCTTATAGCATTTGGTTTTTTGATGTTTGTGTGCTGTTGGAATAGAAGAAAAGATGGAGATGACGATGATGCATTTGTTGGGAAGTTGAATAAGGGAGAGATGTCACCAGAAAAAGCGGTTTCGAGGCACCAGGATGCTAACAATAAGCTGTCTTTCTTTGAAGGATGTAATTATGCCTTTGATTTGGAAGATTTGTTGAGGGCTTCTGCCGAGGTGCTTGGAAAGGGAACATTTGGCACTGCTTATAAGGCGATTCTTGAAGACGTGACCACGGTTGTTGTGAAGAGGTTGAAGGAGGTAGCCTTTGGAAAGAAGGATTTTGAGCAATACATGGAGATTGTTGGAAGTCTTAAACATGAGAATGTGGTTGAGTTGAAAGCATATTATTATTCCAAAGATGAAAAATTGATGGTATATGATTACTACAGTCATGGGAGTGTCTCTTCTTTGTTGCATGGCAAAAGAGGAGAGGAGAGGGTGACTTTAGATTGGGATACTCGGTTAAGAATAGCTTTAGGTGCTGCAAGAGGCATTGCTCGGATCCACGCTGAGAATGGTGGTAAACTCGTACACGGCAACATCAAGTCCTCCAATATCTTTCTCAACACTAAACAATATGGTTGTGTATCTGATCTCGGTCTAGCAACCATATCGAGCTCGCTTCCTCTACCAATCTCACGAGCAGCCGGTTACCGAGCACCCGAAGTCACAGACACCAGAAAAGCAGCACAACCATCAGATGTTTACAGCTTCGGTGTGGTGTTACTAGAGCTTCTGACCGGGAAATCTCCAATCCATACAACTGGTGGTGATGAGATTATCCACCTAGTTAGGTGGGTTCATTCGGTCGTCCGAGAGGAATGGACAGCTGAAGTGTTTGACTTAGAGCTGATGAGATTTCCAAATATCGAAGAAGAGATGGTGGAAATGTTGCAGATAGCTATGTCATGTGTGGTAAGGATGCCAGATCAGAGACCAAAGATCTCAGAAGTTGTGAAGATGATAGAAAATGTGAGACAGATTGATGCACAGACTCAACAATCCTCAGATCAAAACCAAGCAGGACTTAGATTGTCATCTCAACATGATAATGATAATGATAAATCCCCTTCTTGCACTTCTTCCCCATTACCAAAAGGAACTGAATGA 1938 0.4076 MKFLHISCFIMCILCSILCQQGNCEPVEDKEVLLEFVKKFPPSRTLNWNESSSVCDFWTGVTCNEDRSRVIAIRLPGVGFHGTIPPFTISNLPALQILSLRSNFITGFFPSDFSNLKNLSFLYLQFNNLSGPLPDFSPWKNLSVVNLSNNKFNGTIPLSLTNLTQLAGLNLANNSLSGEIPDLGLLRLQVLNLSNNDLHGTVPKSLQRFPDSAFIGNNISLGNSTAVSPVNAPVYEPPSVAEKHGRLSETALLGIIVAGIVIGLIAFGFLMFVCCWNRRKDGDDDDAFVGKLNKGEMSPEKAVSRHQDANNKLSFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDVTTVVVKRLKEVAFGKKDFEQYMEIVGSLKHENVVELKAYYYSKDEKLMVYDYYSHGSVSSLLHGKRGEERVTLDWDTRLRIALGAARGIARIHAENGGKLVHGNIKSSNIFLNTKQYGCVSDLGLATISSSLPLPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRFPNIEEEMVEMLQIAMSCVVRMPDQRPKISEVVKMIENVRQIDAQTQQSSDQNQAGLRLSSQHDNDNDKSPSCTSSPLPKGTE 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00470 645 Pfam Protein kinase domain 333 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00470 645 Gene3D Phosphorylase Kinase; domain 1 296 404 - -
Car06g00470 645 Gene3D Ribonuclease Inhibitor 138 228 IPR032675 -
Car06g00470 645 ProSiteProfiles Protein kinase domain profile. 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00470 645 Gene3D Transferase(Phosphotransferase) domain 1 406 627 - -
Car06g00470 645 MobiDBLite consensus disorder prediction 606 645 - -
Car06g00470 645 SUPERFAMILY Protein kinase-like (PK-like) 334 606 IPR011009 -
Car06g00470 645 SUPERFAMILY L domain-like 40 208 - -
Car06g00470 645 PANTHER PROTEIN, PUTATIVE-RELATED 18 611 - -
Car06g00470 645 PANTHER OS05G0588300 PROTEIN 18 611 - -
Car06g00470 645 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Car06g00470 645 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Car06g00470 645 Pfam Leucine rich repeat 83 129 IPR001611 GO:0005515
Car06g00470 645 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Car06g00470 645 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00470 Car-Chr6 4726348 4730098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00470 1 634 Receptor kinase-like Gene Family AT4G23740 63.665 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car06g00470 Pkinase 3.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00470 - - gmx:100804799 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00470 06 4726348 4730098 Car06g00470 06 4726348 4730098 ECH
Car08g00191 08 1499311 1502591 Car06g00470 06 4726348 4730098 PCT