Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car06g00469 | ATGAACCATCCCTTTCCCAAAATCGTACGAATTCGTCTCTCTGACGCCGACGCCACCGATTCTTCTTCCGATGAAGATAAACCACTTTCCGACTTCAAAACTCGCCGCCGTGTCAAAACTATCGTTAACGAGATTACTTTCGACAAACCAACTCTTTGCAAGAAAACAAACAGAGCTCCGGCGAGTCGATTTTTCTCCGGGAAAAAGTTCCGGGGAGTGAGACAGAGACCTTGGGGGAAATGGTCGGCGGAGATAAGAGACCCATTACGGCGGGTGCGACGGTGGTTGGGAACATACAACACCGCAGAAGAAGCTGCTATTCAGTACGATAAAGCCGCCATTGAAATACGTGGCGAACACGCGCTTACAAATTTTATTCAACCGGCGATTAAAGATATAAACTCCGGTGAAGAATATCGTAGCAACAACGTTCTTTCTCCAAGTTCAGTTCTTCAGTGTTGTTGTTCTTCTTCAGAGATTGAATCCGTAACTGGAAAAGACAATGTTACCCTTCCAATAAGAGAATGTGAAAATGAATGTTCATCTTTGTTTGATAAAGTTTTGGAAGAAAGTACGTTCAAATGTGAGACCGTTTTTCCTATTCATAGTGATACGTTATTTGAGTTTGAAAATGTGACAGAGGAAGAAAGCATGTTCTTATTCCCTGATGATTTTGTTGGAAGCTTTGTTGATTCAAAGTGTCAGAGTTTCGATTTCGATTTCAAAGATTGGAACAGAGATTATGATAATTTCCAAGATTTCGGGGATTTGTTTCTTACTGCAATTTGA | 789 | 0.4144 | MNHPFPKIVRIRLSDADATDSSSDEDKPLSDFKTRRRVKTIVNEITFDKPTLCKKTNRAPASRFFSGKKFRGVRQRPWGKWSAEIRDPLRRVRRWLGTYNTAEEAAIQYDKAAIEIRGEHALTNFIQPAIKDINSGEEYRSNNVLSPSSVLQCCCSSSEIESVTGKDNVTLPIRECENECSSLFDKVLEESTFKCETVFPIHSDTLFEFENVTEEESMFLFPDDFVGSFVDSKCQSFDFDFKDWNRDYDNFQDFGDLFLTAI | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car06g00469 | 262 | SMART | rav1_2 | 69 | 132 | IPR001471 | GO:0003700|GO:0006355 | |
Car06g00469 | 262 | CDD | AP2 | 68 | 125 | IPR001471 | GO:0003700|GO:0006355 | |
Car06g00469 | 262 | PRINTS | Ethylene responsive element binding protein signature | 70 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Car06g00469 | 262 | PRINTS | Ethylene responsive element binding protein signature | 92 | 108 | IPR001471 | GO:0003700|GO:0006355 | |
Car06g00469 | 262 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2 | 6 | 259 | - | - | |
Car06g00469 | 262 | Gene3D | AP2/ERF domain | 68 | 127 | IPR036955 | GO:0003700|GO:0006355 | |
Car06g00469 | 262 | SUPERFAMILY | DNA-binding domain | 69 | 125 | IPR016177 | GO:0003677 | |
Car06g00469 | 262 | Pfam | AP2 domain | 69 | 118 | IPR001471 | GO:0003700|GO:0006355 | |
Car06g00469 | 262 | ProSiteProfiles | AP2/ERF domain profile. | 69 | 126 | IPR001471 | GO:0003700|GO:0006355 | |
Car06g00469 | 262 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 6 | 259 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car06g00469 | Car-Chr6 | 4720686 | 4721474 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car06g00469 | 7 | 163 | AP2-EREBP Transcription Factor Family | AT4G27950 | 43.455 | 2.12e-36 | 130 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Car06g00469 | AP2 | 1.8e-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car06g00469 | - | - | mtr:MTR_8g099215 | 264.618 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car06g00469 | 06 | 4720686 | 4721474 | Car06g00469 | 06 | 4720686 | 4721474 | ECH | |
Car08g00190 | 08 | 1491562 | 1492926 | Car06g00469 | 06 | 4720686 | 4721474 | PCT |