Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00457 ATGCAATACAAAATGGAGAATGAATGTAGCTGGGAATACAACACACTCATCAATGAACTAATTCAGGGGATGGATGTAGCAAAGAGATTGAAGGAAGAGTTGAGGACACCATATTCCCTTAACACAAGGGATTCACAGGTGAAGATCATACTATCTTCTTATGAAAAGGCTCTACAAATTCTAAAATGCAATGAACCAACTTCCAAGACGCAGACCATGAGTCGAGCAAAAACTTTGTTACCCGAGTCCCCGGTGTCTGCTAATGGGAGTCTGCTGAGCGAGGACATTGATGGGGCCATCCAAGATCACCAGGAGGTTAAACACAATTCAAAGAAAAGAAAGGTTACCCCCAAATGGATGGATCAGATAAGAGTGAGCTGTGAAAGTGGCCTTGAAGGACCACATGAAGATGGCTACAACTGGAGAAAATATGGTCAGAAAGATATTCTAGGTGCCAAATATCCAAGAAGTTACTATCGGTGCACCTTCCGCAACACACAAAACTGCTGGGCCACGAAGCAAGTGCAGAGATCGGACGAAGATCCCAATATGTTTGACATAACTTATAGAGGAAGGCATACCTGTTCTCAAGGAAACAATGTCACTGAGCCACGTAAGTCACAAGACAAACAAGAGAAACCACAAAGTCAAAATAATGATATTCACCATGCACAACCATCACAAGAAAACTTCACTAAGTTCAGCAACACCTTGACTGTCAAAACGGATAATCTCGGAAACGAAGAAATGACATGTCCTTTCACCTTTCCTTCCACTTCATTCGGATACACGACGCAAGAAAACCACAGCTGGGTTCCTCCAGCATTGGAGAATGATTCCTTCTTGAGCAGCCTTTTCCAATCACACTTACTATCTCCAGCAACACCAGAATCAAACTATTTCTCGTCTCCAACTTTCCACATGAATGAGTTTGACAGGGTCTATAACAAGCCTTGTTCAGAATCCGACATTACGGAGATCATTTCCACCAACACATCAGTCACAAATTCTCCAATTCCTGATTTCCATTTCTCACTTGATCCAGTGGAAATTGATCCAAATTTCCCTTTCAATAATCTTGGCTTTTTCTCCTAA 1095 0.4201 MQYKMENECSWEYNTLINELIQGMDVAKRLKEELRTPYSLNTRDSQVKIILSSYEKALQILKCNEPTSKTQTMSRAKTLLPESPVSANGSLLSEDIDGAIQDHQEVKHNSKKRKVTPKWMDQIRVSCESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQNCWATKQVQRSDEDPNMFDITYRGRHTCSQGNNVTEPRKSQDKQEKPQSQNNDIHHAQPSQENFTKFSNTLTVKTDNLGNEEMTCPFTFPSTSFGYTTQENHSWVPPALENDSFLSSLFQSHLLSPATPESNYFSSPTFHMNEFDRVYNKPCSESDITEIISTNTSVTNSPIPDFHFSLDPVEIDPNFPFNNLGFFS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00457 364 SUPERFAMILY WRKY DNA-binding domain 134 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g00457 364 MobiDBLite consensus disorder prediction 190 204 - -
Car06g00457 364 ProSiteProfiles WRKY domain profile. 130 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00457 364 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 5 359 - -
Car06g00457 364 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00457 364 MobiDBLite consensus disorder prediction 190 226 - -
Car06g00457 364 Pfam WRKY DNA -binding domain 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00457 364 Gene3D WRKY domain 122 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g00457 364 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 359 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00457 Car-Chr6 4642665 4644654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00457 11 356 WRKY Transcription Factor Family AT4G11070 38.329 1.38e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car06g00457 WRKY 7.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00457 - - gmx:100815760 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00457 06 4642665 4644654 Car06g00457 06 4642665 4644654 ECH