Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00426 ATGGCTACTACTCCAAACAAGTCCCTTCAATCTCCCTCTAACCCCAACCCCCGATCACAATTCTCCCCCGTTACTCCTAAAACCTTACCCACTCGCAGATCCACGCGCTTAAATTCCATCCTCTTCGATTCTCCCAATACCCCTCATCTCCTTGATGCATCCAAACAATCCCTAAATCAACACCAAACTCCGAAAAGACGGAGAGAATTCGGAGACAGTTCTGTTCCTGCAGCGAGATCTCGTCTTGATTTCTCACGCAAAGGCCAAACTGCAACACGAAAAAGTGCCAAGAGAAACGGGAAGGGAGAATCAGTTAAGGTTTTGTTTGCTCCGACATCGCCTGAACAATCGGAAATCAAGAAGAGAAAGAGAAAGAATGGGGTTGAGAAAACGGCTGTTACAACAAGAGGTGTGGCTAAGAGTAAAGTGGAAAAAATTGGGAAGGTGCAGTATTATAAAAAAGTTGTTTATGATGGCGGTGAGTTTGAAGTTGGTAATGATGTTTATGTGAAGAGGAGAGAAGATGCTACATCTGATGAGGAAGATCCTGAAGTAGAGGATTGTAGGTTGTGTTTTAGTTCTGGGGAGGATATTATGATTGAGTGTGATAGTTGTTTGGGTGGGTTTCATTTGAAATGCTTGAAGCCGCCGTTGAAGGAAGTTCCCGAGGGGGATTGGATATGTGAGATCTGCGAGGGTCGTAAGATGGGTAAAGATGTTGATTTCCCAAAGCCTCCGGCGGGTAAGAAGTTAGTTAGGACAATGCGTCAGAGGCTTCAATCAAGTGATTTGTGGGCTGCTCGTATTGAGAGTATATGGAAAGAAGCGGATGGGAGCTATCGGTGTCGAGTACGGTGGTATATGATTCCAGAAGAGACTTCTGTTGGACGACAACCACATAACTTGAGCAGAGAGCTATATCGGACCAATGACTTTGCAAACATTGAGATGGAATCTGTCCTCAGACATTGCTATGTCATGATCCCTAAGCTGTATGCCAAAGCTACCAATGAGGGAGATGACGTTTTCTTGTGCGAATATGAATATGACATCCATTGGCACAGTTTCAAACGCTTGGCTGATATTGACGATGAAAAAGAGAATTCTGAAGAGAGTGATAGTGACGAAGACTGGAACAACAACAAGGAATCAGACTCTGATACCGATGAAGATGTTGAATATGAAGAGGAGAATATTAAAATTGCGCAATCTCAACCTCTAACAAGCCATCAGTTAGCTGCTAATGTGCACAAGGGACGGTTCTCTGGACTTCAGAAGATAGGCACAAAAAGAATTCCAGAGCATATAAGGTGTCACAAACAGACTAATCTTGAAAGAGCAAAGGCTTCACTGTTGTTAGCATCACTGCCTAAATCCTTACCTTGTAGAAATAAAGAaatggatgagataactacattcattaaaggtgctatttctaacgatcaatgtCTGGGGCGTTGCCTCTATATTCATGGTGTTCCAGGAACTGGCAAGACAATGAGTGTACTCTCAGTAATGAGGAGTTTGAGGTCAGAAGTTGATGCAGGAAACATTAAACCATACTGCTTTGTAGAGATTAATGGTCTGAAATTGGCTTCACCAGAGAATATTTATAAGGTCATATATGAGGCATTTACTGGACACAGGGTCGGATGGAAAGAGGCACTCCGTTTGCTAAATGAAAGGTTTGTAGAAGGGAAGAAAACTGGAGAAGAGGCTGACCGGCCGTGTATTTTGCTCATTGATGAACTTGATCTTCTTGTAACCAGAAACCAGTCGGTTCTGTACAATATCCTTGACTGGCCTACCAAGCCACATTCCAAGCTAATTGTGATAGGGATAGCAAATACAATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGCCGGATGGGCATCCAGAGGCTCTGCTTTGCCCCATATAATTATCAGCAGCTTCAAGAAATCATTTCGAGTCGCCTCAATGGAATTGATATATTTGAAAAGCAAGCTGTAGAATTTGCTTCAAGAAAGTTTACTATCTCGGGAGATGCACGTCGTGCTTTGGAAATATGCAGACGTGCAGCTGAAATTGCAGATTATCATACGAATAAGCTAGCTTCAAATCCAGATAATGTTACCGAAGGAAAAGGACTTGTTGGCATGGGAGACGTTGAGGCAGCCATTCAAGAAATGTTCCAAGCACCTCATATTCAAGTGATGAAAAACTGTTCAAGACTAGGCAAAATTTTCCTGACAGCTATGGTGCACGAGCTTTACAAAACAGGAATGGGGGAAACCACTTTTGAAAAGTTGGCAATGACCGCATCATGTCTCTGTACCAGCAATGGAGAAGTGTTTCCTGGATATGATACCCTCCTGCAAGTTGGCTGTAGGCTAGGTGAATGCAGGATCATTTTGTGTGAAGCTGGTGCGAAGCACAGGTTGCAAAAATTGCAGCTCAATTTCCCAAGTGATGATGTAGCCTTTTCGCTGAGAGACTGCAAAGATCTACCTTGGTTGTCAAAATATTTAATGTAG 2523 0.4221 MATTPNKSLQSPSNPNPRSQFSPVTPKTLPTRRSTRLNSILFDSPNTPHLLDASKQSLNQHQTPKRRREFGDSSVPAARSRLDFSRKGQTATRKSAKRNGKGESVKVLFAPTSPEQSEIKKRKRKNGVEKTAVTTRGVAKSKVEKIGKVQYYKKVVYDGGEFEVGNDVYVKRREDATSDEEDPEVEDCRLCFSSGEDIMIECDSCLGGFHLKCLKPPLKEVPEGDWICEICEGRKMGKDVDFPKPPAGKKLVRTMRQRLQSSDLWAARIESIWKEADGSYRCRVRWYMIPEETSVGRQPHNLSRELYRTNDFANIEMESVLRHCYVMIPKLYAKATNEGDDVFLCEYEYDIHWHSFKRLADIDDEKENSEESDSDEDWNNNKESDSDTDEDVEYEEENIKIAQSQPLTSHQLAANVHKGRFSGLQKIGTKRIPEHIRCHKQTNLERAKASLLLASLPKSLPCRNKEMDEITTFIKGAISNDQCLGRCLYIHGVPGTGKTMSVLSVMRSLRSEVDAGNIKPYCFVEINGLKLASPENIYKVIYEAFTGHRVGWKEALRLLNERFVEGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFAPYNYQQLQEIISSRLNGIDIFEKQAVEFASRKFTISGDARRALEICRRAAEIADYHTNKLASNPDNVTEGKGLVGMGDVEAAIQEMFQAPHIQVMKNCSRLGKIFLTAMVHELYKTGMGETTFEKLAMTASCLCTSNGEVFPGYDTLLQVGCRLGECRIILCEAGAKHRLQKLQLNFPSDDVAFSLRDCKDLPWLSKYLM 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00426 840 ProSiteProfiles Zinc finger PHD-type profile. 185 234 IPR019787 -
Car06g00426 840 MobiDBLite consensus disorder prediction 86 101 - -
Car06g00426 840 MobiDBLite consensus disorder prediction 366 394 - -
Car06g00426 840 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 106 835 - -
Car06g00426 840 SMART AAA_5 484 638 IPR003593 -
Car06g00426 840 ProSitePatterns Zinc finger PHD-type signature. 188 231 IPR019786 -
Car06g00426 840 Gene3D - 444 637 IPR027417 -
Car06g00426 840 MobiDBLite consensus disorder prediction 1 129 - -
Car06g00426 840 Pfam ATPase family associated with various cellular activities (AAA) 489 634 IPR003959 GO:0005524|GO:0016887
Car06g00426 840 MobiDBLite consensus disorder prediction 1 60 - -
Car06g00426 840 MobiDBLite consensus disorder prediction 364 394 - -
Car06g00426 840 SMART PHD_3 187 232 IPR001965 -
Car06g00426 840 Pfam AAA lid domain 662 696 IPR041083 -
Car06g00426 840 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 241 IPR013083 -
Car06g00426 840 Gene3D - 638 710 - -
Car06g00426 840 ProSiteProfiles BAH domain profile. 243 360 IPR001025 GO:0003682
Car06g00426 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 454 700 IPR027417 -
Car06g00426 840 Pfam PHD-finger 188 232 IPR019787 -
Car06g00426 840 SUPERFAMILY FYVE/PHD zinc finger 175 235 IPR011011 -
Car06g00426 840 SMART BAH_4 219 360 IPR001025 GO:0003682
Car06g00426 840 Gene3D - 253 443 IPR043151 -
Car06g00426 840 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 106 835 IPR020793 -
Car06g00426 840 Pfam BAH domain 267 357 IPR001025 GO:0003682
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00426 4 839 Core DNA Replication Machinery Family AT4G14700 61.302 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Car06g00426 AAA 2.1e-20 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00426 K02603 - gmx:100798547 1273.46