Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00425 ATGGAAGATGCCGAAACGAAAGGAAGAATCGAGGAAACTGTTACGAAGATCTTACAAGAATCAAACATGGACGAGGTTACAGAATCCAAGGTTCGAAAGCAAGCCTCCAACGAACTTGGCATCAACCTATCTCAGCCCCATTTCAAATCCTTCGTGAAACAAATCATTGAAGCTTTTATTCAACAGAAGCAACAACAGCAAGAGGAAGaagaagaagaaaaagaaaaagaaaaagaaaaaCAACATCACAAACAAGAGGGAGGTGTTTCCAACGACAGTAAGTTGTACGATGATTCTGGCGATCTTGTCATTTGCGAGCTTGGAAAAAAGAGAAAGGTGACTATTCAGGAGTTCAGAGGGAAAACATTTGTCTCCATTCGTGAGTTTTATACGAAGGATGGCAAGGAACTTCCTTCTTCTAAAGGAATAAGTTTGACTGAGGAGCAGTGGTCAGCCTTTAAGAAAAATGTGCCTGCCATAGAAAAAGCCATTCAGAAAATGGAGTCACACGTATAA 516 0.3895 MEDAETKGRIEETVTKILQESNMDEVTESKVRKQASNELGINLSQPHFKSFVKQIIEAFIQQKQQQQEEEEEEKEKEKEKQHHKQEGGVSNDSKLYDDSGDLVICELGKKRKVTIQEFRGKTFVSIREFYTKDGKELPSSKGISLTEEQWSAFKKNVPAIEKAIQKMESHV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00425 171 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 170 IPR045125 GO:0003713|GO:0060261
Car06g00425 171 PIRSF RNA_polymII_KELP 1 171 IPR017415 -
Car06g00425 171 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 4 170 - -
Car06g00425 171 Gene3D - 2 64 - -
Car06g00425 171 Coils Coil 53 86 - -
Car06g00425 171 MobiDBLite consensus disorder prediction 1 33 - -
Car06g00425 171 MobiDBLite consensus disorder prediction 62 97 - -
Car06g00425 171 Pfam Transcriptional Coactivator p15 (PC4) 105 156 IPR003173 GO:0003677|GO:0006355
Car06g00425 171 MobiDBLite consensus disorder prediction 64 91 - -
Car06g00425 171 SUPERFAMILY ssDNA-binding transcriptional regulator domain 104 166 IPR009044 GO:0003677|GO:0006355
Car06g00425 171 Gene3D Transcriptional Coactivator Pc4; Chain A 95 171 IPR009044 GO:0003677|GO:0006355
Car06g00425 171 SUPERFAMILY DEK C-terminal domain 5 61 - -
Car06g00425 171 Pfam DEK C terminal domain 6 60 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00425 Car-Chr6 4392152 4395090 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Car06g00425 DEK_C 2.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00425 K25815 - gmx:100305633 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00425 06 4392152 4395090 Car06g00425 06 4392152 4395090 ECH