Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00406 ATGGTGATGGATTTTTCATCACTCTCTAACATATTCTATTTATCATTCTCACTAACGCTATTACTCACTGTAACAGGATCACCATTACTCATGGACGCTAAACCCTCAACGCCTCTCGTATCCTTTCTCCAACGTCTTCAACAAACTGCATTCAACACATTCACCAATTCCACCCACTTCGATCCTAAAACCTACGTCGATTTACCCCTCAAGTTCCCCCTTTCTATAACTGACCAAGCCTTCCGGAACCTTCCAAAGTCCTCCAATGGTTCGGTGTCAGTTGATGATTTGAACCTTTTTATAGAAACTTACTTCGAAGGTGCAGGGGATGACCTCGTGTACTTCGATCCAGAGGATTTCGTACCCGAACCTGAAGATTTTTTACCCAAAGTGAAACACCCTGAAGTTAGAGCATGGGCGCTTGAGGTTCATAAACTTTGGAAAAACTTGAGTAGGAAAATATCCTCTCAAGTGACGGCACACCCTAACTACCATACTCTGCTTCCTCTTCCTGATTCTGTTGTTATTCCTGGTTCGCGATTTCGTGAAGTTTATTACTGGGATTCCTACTGGGTGATTAGGGGGTTGTTGGCGAGTAAAATGTATAAGACAGCTAAATCTATTGTCACCAATCTCCTTTCCTTAATTGAGGAATATGGATTTGTTCTTAATGGTGCCAGAGTATACTACACTAACAGGAGCCAGCCTCCCCTTTTAAGCGCTATGATTTATGAGATATACTGTAGCACTGGTGATGTAGAATTAGTCAAAAGATCTCTACCTGCACTTCTGAAAGAGTATGAGTTTTGGAATTCAGACATACATAAAGTGACCATTTCGGACGCACAAGGTTGCACTCACACATTAAATCGCTATTATGCAATGTGGAACAAACCCAGACCAGAATCGTCCACAATGGACAAGGCATCTGCTTCCAAGTTTCCGACTGAATCAGAAAAACAACATTTTTATCGTGAACTAGCATCAGCTGCTGAATCAGGATGGGATTTCAGCACAAGATGGATGAGACACCCTCCCAACTTCACAACATTGTCTACAACATCAGTGATACCTGTTGATTTAAATGCATTTCTACTTGGGATGGAACTTAATATTGCTTTCTTTGCAAAAGTTACTGGAGATAATAGCACTGCCAAACACTTCCTGCAAATTTCTGATGTTAGAACAAAGGCAATGAATTCTGTTTTCTGGAATGCAAACATGAAACAATGGCTTGATTGCTGGCTCAGCAATACCACATCTGAGGTTCACGTTTTGGATACACTGCACCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCATTTTACTCAGATGCTTTGCTTGTGGGTGATGTTCTTGAAAGTCTCAAAACTTCTGGCCTGCTTCGTGCTGCTGGAGTTGCAACTTCTCTGAGTGATTCAGGACAGCAGTGGGACTTTCCGAATGGTTGGGCTCCACTTCAACACATGTTAGTTGAAGGCCTGTTAAAATCAGGGTTGGAAGAAGCAAGATCATTGGCTGAAGAAATTGCCATAAGATGGATCACAACCAATTATGTTGTTTACAAGAAAACGAATGTAATGCATGAAAAGTATGACGTGGAGCATTGCGGAGAATTTGGAGGTGGTGGTGAATATGTACCCCAGACTGGTTTTGGCTGGTCGAATGGTGTTGTGTTGGCATTCTTGGAGGAATTTGGATGGCCTGAAGATCGTAAAATCGAATGCTGA 1749 0.418 MVMDFSSLSNIFYLSFSLTLLLTVTGSPLLMDAKPSTPLVSFLQRLQQTAFNTFTNSTHFDPKTYVDLPLKFPLSITDQAFRNLPKSSNGSVSVDDLNLFIETYFEGAGDDLVYFDPEDFVPEPEDFLPKVKHPEVRAWALEVHKLWKNLSRKISSQVTAHPNYHTLLPLPDSVVIPGSRFREVYYWDSYWVIRGLLASKMYKTAKSIVTNLLSLIEEYGFVLNGARVYYTNRSQPPLLSAMIYEIYCSTGDVELVKRSLPALLKEYEFWNSDIHKVTISDAQGCTHTLNRYYAMWNKPRPESSTMDKASASKFPTESEKQHFYRELASAAESGWDFSTRWMRHPPNFTTLSTTSVIPVDLNAFLLGMELNIAFFAKVTGDNSTAKHFLQISDVRTKAMNSVFWNANMKQWLDCWLSNTTSEVHVLDTLHQNQNVFASNFVPLWMKPFYSDALLVGDVLESLKTSGLLRAAGVATSLSDSGQQWDFPNGWAPLQHMLVEGLLKSGLEEARSLAEEIAIRWITTNYVVYKKTNVMHEKYDVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDRKIEC 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00406 582 PANTHER TREHALASE 37 582 IPR001661 GO:0004555|GO:0005991
Car06g00406 582 Pfam Trehalase 60 573 IPR001661 GO:0004555|GO:0005991
Car06g00406 582 SUPERFAMILY Six-hairpin glycosidases 56 575 IPR008928 GO:0005975
Car06g00406 582 ProSitePatterns Trehalase signature 2. 483 492 IPR018232 GO:0004555|GO:0005991
Car06g00406 582 PANTHER TREHALASE 37 582 - -
Car06g00406 582 PRINTS Glycosyl hydrolase family 37 signature 219 237 IPR001661 GO:0004555|GO:0005991
Car06g00406 582 PRINTS Glycosyl hydrolase family 37 signature 289 306 IPR001661 GO:0004555|GO:0005991
Car06g00406 582 PRINTS Glycosyl hydrolase family 37 signature 324 341 IPR001661 GO:0004555|GO:0005991
Car06g00406 582 PRINTS Glycosyl hydrolase family 37 signature 356 373 IPR001661 GO:0004555|GO:0005991
Car06g00406 582 PRINTS Glycosyl hydrolase family 37 signature 476 492 IPR001661 GO:0004555|GO:0005991
Car06g00406 582 PRINTS Glycosyl hydrolase family 37 signature 556 569 IPR001661 GO:0004555|GO:0005991
Car06g00406 582 Gene3D - 46 580 IPR012341 GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00406 36 582 Trehalose Biosynthesis Gene Families AT4G24040 59.091 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00406 K01194 - gmx:547539 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00406 06 4251350 4256379 Car06g00406 06 4251350 4256379 ECH