Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00397 ATGGGGATTTGCTTCAGCATTGAAGAACACAAACACTTCTCCCTCTCCGATTCAAATTCAAACCCTAAAACTGCAGTAGGAAATGATGAATCCGATGCACGAACTACTCCATTAGGTTCCGGTTCGATGAATATCAAAGAACTTCGCGAAGGTGCTGGTTACAGCAACGTCGATATTTTTACTTACCAGGAATTGAGACTCGCAACGAAGCATTTTCGTCCTGATTTCATTTTAGGAGAAGGTGGATTTGGAGTTGTATATAAAGGAGTTATAGATGATAGTGTAAGGACCGGTTACAAATCCACTGAAGTCGCCATTAAAGAACTTAATCGCGAAGGATTTCAAGGCGATAGGGAATGGCTTACTGAAGTTAACTATTTGGGTCAATTCAGTCACCCAAATCTTGTGAAGCTCATTGGATACTGCTGCGAGGACGAACACCGGTTGTTGGTCTATGAGTTCATGGCAAGCGGGAGTTTGGAGAAGCATCTTTTTCGCAGAGCGGGCTCAACATTGAATTGGTCAAAAAGAATGAAGATTGCTTTACACGCTGCAAGAGGTCTGGCATTTCTTCATGGTGCAGAAAGGCCCATCATATATCGTGATTTCAAGACATCAAATATCTTGCTAGATGCGGATTTCAATGCAAAGCTTTCAGACTTTGGCCTTGCAAAGGATGGGCCAATGGGGGACCAAACACATGTTTCAACACGAGTAATGGGAACATATGGATATGCTGCTCCGGAGTATGTCATGACTGGGCACTTGACTGCTCGAAGCGATGTGTATGGCTTTGGGGTGGTGCTACTTGAATTACTTATTGGTAGGAAATCACTAGACAAGAGCAGGCCCAGCCGAGAGCACAACTTGGTTGAGTGGGCACGCCCACTGTTGAATCATAATAAAAAACTTCTGAAAATTTTAGACCCAAAAATAGAAGGGCAATATTCAAGTAAAGCTGCAGCAAAGGTGGCTCATTTGGCATACCAATGTCTTAGCCAAAACCCGAAAGGCAGACCTCTCATGAGCCAGGTTGTTGAAATCCTTGAAGATTTTCAGTCAAAGGCGGCAAATGAAGAAGATCAAATCCTTCAAAGTGGTGGTAGCAGTATAACCATTTATGAGGTTCCAAAGGGCAATGACACTCCAACTTAG 1155 0.4329 MGICFSIEEHKHFSLSDSNSNPKTAVGNDESDARTTPLGSGSMNIKELREGAGYSNVDIFTYQELRLATKHFRPDFILGEGGFGVVYKGVIDDSVRTGYKSTEVAIKELNREGFQGDREWLTEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEFMASGSLEKHLFRRAGSTLNWSKRMKIALHAARGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRKSLDKSRPSREHNLVEWARPLLNHNKKLLKILDPKIEGQYSSKAAAKVAHLAYQCLSQNPKGRPLMSQVVEILEDFQSKAANEEDQILQSGGSSITIYEVPKGNDTPT 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00397 384 ProSitePatterns Protein kinases ATP-binding region signature. 78 107 IPR017441 GO:0005524
Car06g00397 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Car06g00397 384 MobiDBLite consensus disorder prediction 14 43 - -
Car06g00397 384 PANTHER OS01G0588500 PROTEIN-RELATED 29 379 - -
Car06g00397 384 ProSiteProfiles Protein kinase domain profile. 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00397 384 Gene3D Phosphorylase Kinase; domain 1 47 154 - -
Car06g00397 384 Gene3D Transferase(Phosphotransferase) domain 1 155 372 - -
Car06g00397 384 MobiDBLite consensus disorder prediction 17 42 - -
Car06g00397 384 CDD STKc_IRAK 78 352 - -
Car06g00397 384 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL17-RELATED 29 379 - -
Car06g00397 384 Pfam Protein tyrosine and serine/threonine kinase 78 349 IPR001245 GO:0004672|GO:0006468
Car06g00397 384 SUPERFAMILY Protein kinase-like (PK-like) 54 349 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00397 Car-Chr6 4154628 4159199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00397 4 349 Glycoside Hydrolase AT3G07070 46.328 1.26e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car06g00397 PK_Tyr_Ser-Thr 9.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00397 - - gmx:100800465 681.789