Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00395 ATGGCACTCACCACTCTTGGGAAGAATAATAACACAACATTATTGTTCATCACATTCTTTATATTGTCATGTGTTGTTGAATCATCTTATGCTGCTTCTGACTCTGAAATACTCCTCAAGGTTAAGGAGAGTCTACAAAGCAGTAAAAATAATGCATTTCTGTCATCATGGAACACATCATCATCTCCTTGTAATGGTGATCATGCAAATTGGTTTGGTGTTCGTTGTTATCAAGGTAAATTGTGGGGTTTGAAGCTTGAAAATATGGGGCTATCAGGGGTCATTGATGTTGACTCTCTTAGGGAGTTACCATTTCTTAGAACAATTAGTTTCATGAATAATGATTTTGATGGTGATTGGCCTGAGATTAACAAGCTTGTTGGTCTTAAATCAATTTACCTTTCAAATAACAAGTTTTCAGGGGAAATTCCTATGGAAACTTTTGAGGGTATGCAATGGTTGAAGAAAATTCATTTGTCAAATAATCAGTTTACAGGTCTTATTCCATCTTCTGTGGTTTTGTTGCCAAAGCTTGTGGAGTTGAGATTGGATGGAAACAAATTCACTGGTCCTCTTCCTCATCTTAGACAATCCAAATTGAAATCTTTCAGCGTAGCTAATAATCAGTTGCAGGGCCAAATTCCTACAACTCTTAGTAAAATCGCCGCTTCTGCCTTTGCTGGCAATGAAGATTTATGTGGAACCCCATTGGCAGCATGTCCTTCAAAGAAACCTTCAATTGCAAGTATTTGTGTGGTTGTTGTGGTTGTTTGTGTGGCACTGATAGTAATTGCAGTTGCTGTGATATTCATCCTTCATCAAAGAAGAAAGCGAGGACCATCATCGTCTCTAGACAATCCGCCTTCGGGCGCGCACAACAACAAAGTAGGACGTGTGAGGGACGTTGGTAATGAAAGTCATAGATCATCAAGATCAATAAGTTCCAACCATAGTAGAAGAGGTGATCACATGAAGTTGTCTTTTATAAGAGATGACAGAGAGAGGTTTGATTTGCAAGAGTTGTTGAGAGCCTCAGCTGAGATTTTGGGAAGTGGTTGTTATAGTTCTTCTTATAAAGCTTCTTTGATGAATGGACCAACAATAGTGGTAAAGAGGTTCAAGCAAATGAATAATGTAGGGAAGGAAGAGTTTCAAGAACACATGAGAAGGATAGGAAAGTTGAATCATCCTAATCTCATTCCTCTTGTGGCTTACTATTATAGAAAGGAAGAGAAGCTTTTGGTTACTGACTTTGTTCAGAATGGAAGCCTCGCCGTTCGCCTTCATGGACACCAAGCTCTTGGAGAACCAAGCCTTGATTGGCCAATAAGGTTGAAGATAGTGAAAGGCATAGCAAGAGGACTTGAATATCTATACAAGGATATGCCAAGTCTAATAGCACCTCATGGAAATCTGAAATCAGCAAATGTTCTTCTAACTCAAACATTTGAGCCACTCCTCACTGACTATGGATTAGTCCCAGTTACAAACCAAGAAATGGCCAAGGACATAATGGTAATTTACAAATCACCTGAATATTTACAACAAGGAAGAATCACAAAGAAAAGTGATGTTTGGTGTCTTGGAATACTAATTATTGAGATTCTAACTGGAAAATTCCCTGCTACCTTTTTACAACAAGGTAAAGGAAGTGAGGTGAGTTTAGCAAATTGGGTTGATTCAGTTGTACCTGAGGAGTGGAATAGTTCAGTTTTTGATAAAGAAATGGGTGCAACAATTAATGGGGAAGGTGAAATGGTAAAACTTTTGAAGATAGCAGTGAGTTGTTGTGAAGGTGATGTGGATAAGAGATGTGATTTGAAAGAAGCTGTAGAGAAAATCCAAGAAATTAATGAGAGGGATAGTGAGGAGTTTTATACAGCTGATATGAAATGA 1896 0.3824 MALTTLGKNNNTTLLFITFFILSCVVESSYAASDSEILLKVKESLQSSKNNAFLSSWNTSSSPCNGDHANWFGVRCYQGKLWGLKLENMGLSGVIDVDSLRELPFLRTISFMNNDFDGDWPEINKLVGLKSIYLSNNKFSGEIPMETFEGMQWLKKIHLSNNQFTGLIPSSVVLLPKLVELRLDGNKFTGPLPHLRQSKLKSFSVANNQLQGQIPTTLSKIAASAFAGNEDLCGTPLAACPSKKPSIASICVVVVVVCVALIVIAVAVIFILHQRRKRGPSSSLDNPPSGAHNNKVGRVRDVGNESHRSSRSISSNHSRRGDHMKLSFIRDDRERFDLQELLRASAEILGSGCYSSSYKASLMNGPTIVVKRFKQMNNVGKEEFQEHMRRIGKLNHPNLIPLVAYYYRKEEKLLVTDFVQNGSLAVRLHGHQALGEPSLDWPIRLKIVKGIARGLEYLYKDMPSLIAPHGNLKSANVLLTQTFEPLLTDYGLVPVTNQEMAKDIMVIYKSPEYLQQGRITKKSDVWCLGILIIEILTGKFPATFLQQGKGSEVSLANWVDSVVPEEWNSSVFDKEMGATINGEGEMVKLLKIAVSCCEGDVDKRCDLKEAVEKIQEINERDSEEFYTADMK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00395 631 PANTHER LRR RECEPTOR-LIKE KINASE 12 625 - -
Car06g00395 631 MobiDBLite consensus disorder prediction 278 319 - -
Car06g00395 631 Gene3D Transferase(Phosphotransferase) domain 1 419 629 - -
Car06g00395 631 ProSiteProfiles Protein kinase domain profile. 343 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00395 631 Pfam Leucine rich repeat 128 188 IPR001611 GO:0005515
Car06g00395 631 SUPERFAMILY L domain-like 62 220 - -
Car06g00395 631 Pfam Protein kinase domain 346 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00395 631 SUPERFAMILY Protein kinase-like (PK-like) 347 618 IPR011009 -
Car06g00395 631 Gene3D Phosphorylase Kinase; domain 1 308 418 - -
Car06g00395 631 Gene3D Ribonuclease Inhibitor 31 195 IPR032675 -
Car06g00395 631 Gene3D Ribonuclease Inhibitor 198 240 IPR032675 -
Car06g00395 631 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 625 - -
Car06g00395 631 Pfam Leucine rich repeat N-terminal domain 32 76 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00395 Car-Chr6 4129593 4132846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00395 29 628 Receptor kinase-like Gene Family AT5G35390 53.130 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car06g00395 Pkinase 4.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00395 - - gmx:100804368 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00395 06 4129593 4132846 Car06g00395 06 4129593 4132846 ECH