Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00393 atGTCGAGGTCTATTCAAGATAAGAAGCTAGGTGCAGGACGTGTTGTGGCAGTGGCAATTGAGAACAACAAAACAAGCCAATATGCAGCTAAATGGGCTGTTGATAATCTTCTTCCTAAAGATCAACATCTTTTATTAGTTCATGTTAGACAAAGAGCTTCTTCAATTCCTACAACAACTGGAAATCATGTTTCTGTGGATGGCAATGATGATGTTGCTAGAGCATACATGCAACAAATGGACAATGAATCCAAGGAGCTTTTCGCTTCGTTTCGCGTCTTCTGCAATAGAAAAAATATACTATGCAAAGAAGTCTTGTTGGAAGACTTGGATGTATCTAAGGCCATTATAGAAGGTATTGCAACATATTCCATTGAGCTTCTAGTACTTGGTGCAGCATCAAGGAGTGGTCTTGTAAGAAGATTTAGGACAACTGATGTTCCTAACCTTGTGTCTAAAGGAGCACCTCCATTCTGCACTGTCTACATTATTTCCAAAGGAAAAATTTCATCTGTGAAAACTGCTACTACTCCATTAGCATCTAAAGCTATACCGCGTAACAATGGATTGCAGCAACAACAAATACTAAAAAATCCTGAACGAATGGATGCACAACAACTATTGCGAAACCATCCACCGCGACCATCAACAGAGAAGCCAGCATACCTTGCACGCCATCAAATCGAAGAAGATGAAATCAAATCACCATTCACAAGAGGTGCAAGACCAATTCATAGATCATATGAGTCCACAATCCCTGACTCTGATATCTCATTTGTGAGCAGTGGAAGGCCAAGTGTTGATAGGATGTTCCCTTCATTGTATGAAGAAATGGACTCACAAACCGGAATGACCCCTCGGCTTTCGATAGGCTCGGATTTCGATCTCAGAAGCTTCGGTTCGTCTTTCTCAGGTGCCAAGTCAATTGATCAAAATGACTATTCATTCAGCTCACAAGACAGTGGGATGTCCATGTCATCACAACCAAGGATATCAAACTCGGATGAAGTGGAAGCTGAAATGAGGAGATTGAGGTTAGAATTGAAGCAAACAATGGAAATGTACAGTACAGCTTGCAAGGAAGCATTGACAGCTAAACAAAAGGCACTCGAACTTCAGCGTTGGAAATTGGATGAACAAAGAAAAATAGAAGATGCGCGATTGTCTGAAGAAACAGCGTTGGCAATAGCTGAGAAAGAGAGAGCAAAATGTAAAGTTGCTCTGGAGGCAGCAGAAGCATCTAGAAAAATTGCAGAGTTGGAAGCACAGAAAAGAGTGAGTGCAGAAATGAAATCTCACACAGAATCTGAGTATAAGAAGAGGTCAGGAGGAGATGGTATGTTACATGGTCCTGCAAGGTACAGAAGATACACTATTGAGGAAATAGAAGAAGCAACAAAGTACTTTTCTAATTCACTGAAGATTGGAGAAGGAGGTTATGGACCTGTCTACAGAGCTGAACTAGATCACACTGCAGTTGCAATAAAAGTGTTAAAACCAGATGCAGCTCAAGGACGCTCGCAGTTTCAACAAGAGGTTGAAGTGCTGAGTAGCATAAGGCATCCAAACATGGTTCTCCTCTTAGGAGCATGTCCAGAGTATGGTTGCCTAGTGTATGAGCACATGGCTAGTGGAAGCTTAGATGATTGCCTCTTCAGGAGAAACAACAGTAAACTACCAGTTCTTCCGTGGCAGCTAAGATTCCGAATTGCAGCGGAGATTGCCACCGGACTCCTTTTCCTTCACCAGACAAAACCAGAACCGTTGGTGCACCGTGACTTAAAACCTGGAAACATTTTGCTCGACAGGAACTTCGTCAGCAAGATCAGTGATGTTGGGTTGGCAAGGCTAGTCCCTCCTTCGGTTGCAGACACTGTCACACAGTATCGTATGACAGCAACTGCTGGAACTTTCTGTTACATTGATCCTGAATACCAGCAAACGGGCATGCTCGGAACAAAGTCTGATGTTTACTCACTTGGGATCATGCTTCTACAGATGATAACAGCAAAGCCACCAATGGGATTGAGTCATCATGTTGCAAGATCTATTGAGAGAGGAACTTTTGCTGATATGCTTGATCCTGCTGTTGAGGACTGGCCAATGGAACAAGCTATGCATTTTGCCAAGCTTGCTCTTCAGTGTGCTGAAATGAGAAGAAAAGATAGACCTGATCTGGGCAAAGTTATTTTGCCTGAACTCAACAAACTCAGAGATTTtgctgatgaaaatatgcctatgatgatgatgatgtatggtggtgctgCAGGATTCACACCAAGAAGTAACAACAATTATTCGCGCTCTACGTTTTTGCAATCAATTCAAGACACAATGAGTGAATCACCGTCAATGTCTGGAATGTCAGGATATGAAAGCCGTTCAAGCTCATAA 2394 0.4148 MSRSIQDKKLGAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQHLLLVHVRQRASSIPTTTGNHVSVDGNDDVARAYMQQMDNESKELFASFRVFCNRKNILCKEVLLEDLDVSKAIIEGIATYSIELLVLGAASRSGLVRRFRTTDVPNLVSKGAPPFCTVYIISKGKISSVKTATTPLASKAIPRNNGLQQQQILKNPERMDAQQLLRNHPPRPSTEKPAYLARHQIEEDEIKSPFTRGARPIHRSYESTIPDSDISFVSSGRPSVDRMFPSLYEEMDSQTGMTPRLSIGSDFDLRSFGSSFSGAKSIDQNDYSFSSQDSGMSMSSQPRISNSDEVEAEMRRLRLELKQTMEMYSTACKEALTAKQKALELQRWKLDEQRKIEDARLSEETALAIAEKERAKCKVALEAAEASRKIAELEAQKRVSAEMKSHTESEYKKRSGGDGMLHGPARYRRYTIEEIEEATKYFSNSLKIGEGGYGPVYRAELDHTAVAIKVLKPDAAQGRSQFQQEVEVLSSIRHPNMVLLLGACPEYGCLVYEHMASGSLDDCLFRRNNSKLPVLPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTATAGTFCYIDPEYQQTGMLGTKSDVYSLGIMLLQMITAKPPMGLSHHVARSIERGTFADMLDPAVEDWPMEQAMHFAKLALQCAEMRRKDRPDLGKVILPELNKLRDFADENMPMMMMMYGGAAGFTPRSNNNYSRSTFLQSIQDTMSESPSMSGMSGYESRSSS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00393 797 Gene3D Transferase(Phosphotransferase) domain 1 542 750 - -
Car06g00393 797 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 797 - -
Car06g00393 797 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 144 - -
Car06g00393 797 MobiDBLite consensus disorder prediction 778 797 - -
Car06g00393 797 SUPERFAMILY Protein kinase-like (PK-like) 449 729 IPR011009 -
Car06g00393 797 MobiDBLite consensus disorder prediction 310 336 - -
Car06g00393 797 CDD STK_N 15 167 - -
Car06g00393 797 Pfam Protein kinase domain 472 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00393 797 Pfam Universal stress protein family 14 142 IPR006016 -
Car06g00393 797 MobiDBLite consensus disorder prediction 310 334 - -
Car06g00393 797 Gene3D HUPs 14 165 IPR014729 -
Car06g00393 797 Coils Coil 334 354 - -
Car06g00393 797 SMART serkin_6 469 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00393 797 PANTHER OS02G0152300 PROTEIN 1 797 - -
Car06g00393 797 Gene3D Phosphorylase Kinase; domain 1 450 541 - -
Car06g00393 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Car06g00393 797 ProSiteProfiles Protein kinase domain profile. 469 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00393 797 Coils Coil 394 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00393 Car-Chr6 4118677 4123361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00393 8 763 Receptor kinase-like Gene Family AT1G78940 54.826 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Car06g00393 Pkinase 1.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00393 - - gmx:100803837 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00393 06 4118677 4123361 Car06g00393 06 4118677 4123361 ECH
Car06g00393 06 4118677 4123361 Car08g01860 08 28531964 28535532 PCT