Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00390 ATGAATCTGGTTTGCCATGTGAATACAGAGAAGCTCTTAGAAGATCCATGGGCATGGAGAAAATATGGACAAAAACCCATTAAAGGGTCTCCTTATCCAAGGAATTACTACAAATGTAGCAGTGCCATAGATTGTGCAGCAAGAAAGCTTGTAGATAAAAGCACTTCCAAAGAGGACATTTTTGTTGTGACATATTGGCTACTTATGACTCATTTTGTGGGGTGTAAACCATGTGGAAAATTTGGAGATTACCCTGTTGAAGGGTGTTTGAAACAAATGGATCGTGCTTATAATTTTTGGGATAATAAGATATTCCAGATGTATGATTTTACTCACAAGTCACTTGCTAGTAGAAGGGATTGGATTTTTGGTGGAGGAAACTCTCCTGCCTTTGTCGTGGCAGCTGCTGCAGTCCTTATGAGTAGGCTCTTAGCTGACAGAAATTTTGTTCTAACTTTACAACACATTATATGCATGACTAAGAAACATCTAGCTTCTGATATGCGTGAGCACCACCAAGTATTTGATTCATTATCATGTTATAACACCTTCATGGAAGTTGCAAGACATCAACTGTCCCCACCATTTGTTTTGGCTCTCCAAATTCGCCAACTAGAATCTTTCCTTTTAACTGCAAAAGATTACTTCAAACAGTGCAGAAGCAGGACATAA 672 0.3869 MNLVCHVNTEKLLEDPWAWRKYGQKPIKGSPYPRNYYKCSSAIDCAARKLVDKSTSKEDIFVVTYWLLMTHFVGCKPCGKFGDYPVEGCLKQMDRAYNFWDNKIFQMYDFTHKSLASRRDWIFGGGNSPAFVVAAAAVLMSRLLADRNFVLTLQHIICMTKKHLASDMREHHQVFDSLSCYNTFMEVARHQLSPPFVLALQIRQLESFLLTAKDYFKQCRSRT 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00390 223 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 3 65 - -
Car06g00390 223 ProSiteProfiles WRKY domain profile. 8 74 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00390 223 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 65 IPR044810 GO:0003700
Car06g00390 223 SMART WRKY_cls 13 73 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00390 223 Pfam WRKY DNA -binding domain 14 65 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g00390 223 SUPERFAMILY WRKY DNA-binding domain 7 67 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g00390 223 Gene3D WRKY domain 1 66 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00390 Car-Chr6 4050082 4053445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00390 66 119 Glycosyltransferase AT3G62720 81.481 5.03e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car06g00390 WRKY 2.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00390 K08238 - fve:101307777 106.301